Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102590414   pentatricopeptide repeat-containing protein At1g77170 
 sly-u.5   104645802   pentatricopeptide repeat-containing protein At1g77170, mitochondrial 
 nta-r.1   107785524   pentatricopeptide repeat-containing protein At1g77170, mitochondrial 
 ath-u.5   AT1G77170   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100805136   pentatricopeptide repeat-containing protein At1g77170, mitochondrial 
 bra-r.6   103832170   pentatricopeptide repeat-containing protein At1g77170, mitochondrial 
 vvi-u.5   100250752   pentatricopeptide repeat-containing protein At1g77170, mitochondrial 
 mtr-u.5   11408103   pentatricopeptide repeat-containing protein At1g77170, mitochondrial 
 ghi-r.1   107940143   pentatricopeptide repeat-containing protein At1g77170, mitochondrial-like 
 bna-r.1   106354627   pentatricopeptide repeat-containing protein At1g77170, mitochondrial-like 
 bna-r.1   106392164   pentatricopeptide repeat-containing protein At1g77170, mitochondrial-like 
 cit-r.1   102614142   pentatricopeptide repeat-containing protein At1g77170, mitochondrial 

close


Top 50 coexpressed genes to 102590414 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 102590414 (sot-r.1 coexpression data)

CoexMap"102590414"


sotLOC102590414 | Entrez gene ID : 102590414    
Species sot sly nta ath gma bra vvi mtr ghi bna cit sbi osa tae hvu ppo zma cre bdi
Paralog 1 1 1 1 1 1 1 1 1 2 1 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1335 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4214 genes)  IEA  
Protein XP_006348098.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 5,  cyto_mito 3,  nucl 2,  chlo 1,  cyto_nucl 1  (predict for XP_006348098.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_006348098.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102590414
sly-u.5
for
104645802
nta-r.1
for
107785524
ath-u.5
for
AT1G77170
gma-u.5
for
100805136
bra-r.6
for
103832170
vvi-u.5
for
100250752
mtr-u.5
for
11408103
ghi-r.1
for
107940143
bna-r.1
for
106354627
bna-r.1
for
106392164
cit-r.1
for
102614142


Ortholog ID: 13231
Species sot sly nta ath gma bra vvi mtr ghi bna bna cit
Symbol LOC102590414 LOC104645802 LOC107785524 AT1G77170 LOC100805136 LOC103832170 LOC100250752 LOC11408103 LOC107940143 LOC106354627 LOC106392164 LOC102614142
Function* pentatricopeptide repeat-containing protein At1g77170 pentatricopeptide repeat-containing protein At1g77170, mitochondrial pentatricopeptide repeat-containing protein At1g77170, mitochondrial Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At1g77170, mitochondrial pentatricopeptide repeat-containing protein At1g77170, mitochondrial pentatricopeptide repeat-containing protein At1g77170, mitochondrial pentatricopeptide repeat-containing protein At1g77170, mitochondrial pentatricopeptide repeat-containing protein At1g77170, mitochondrial-like pentatricopeptide repeat-containing protein At1g77170, mitochondrial-like pentatricopeptide repeat-containing protein At1g77170, mitochondrial-like pentatricopeptide repeat-containing protein At1g77170, mitochondrial
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 6
bna03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102590414 104645802 107785524 844054 100805136 103832170 100250752 11408103 107940143 106354627 106392164 102614142
The preparation time of this page was 0.2 [sec].