ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sot-r.1	102594422	translocon-associated protein subunit beta-like
sot-r.1	102586746	translocon-associated protein subunit beta-like
sly-u.5	101259897	uncharacterized LOC101259897
nta-r.1	107801583	uncharacterized LOC107801583
nta-r.1	107789931	uncharacterized LOC107789931
nta-r.1	107816303	uncharacterized LOC107816303
ath-u.5	AT5G14030	translocon-associated protein beta (TRAPB) family protein
gma-u.5	100500066	translocon-associated protein subunit beta-like
gma-u.5	100306406	uncharacterized LOC100306406
bra-r.6	103850914	translocon-associated protein subunit beta
bra-r.6	103854291	uncharacterized LOC103854291
bra-r.6	103856052	translocon-associated protein subunit beta
vvi-u.5	100244388	uncharacterized LOC100244388
vvi-u.5	100241257	uncharacterized LOC100241257
ppo-u.5	7461631	uncharacterized LOC7461631
ppo-u.5	18107126	uncharacterized LOC18107126
mtr-u.5	11443082	translocon-associated protein subunit beta
ghi-r.1	107893240	translocon-associated protein subunit beta
ghi-r.1	107897297	translocon-associated protein subunit beta
ghi-r.1	107912376	uncharacterized LOC107912376
bna-r.1	106347728	uncharacterized LOC106347728
bna-r.1	106372248	translocon-associated protein subunit beta
bna-r.1	106402232	uncharacterized LOC106402232
cit-r.1	102615464	uncharacterized LOC102615464
osa-u.5	4326440	uncharacterized LOC4326440
osa-u.5	4337538	uncharacterized LOC4337538
zma-u.5	100272685	uncharacterized LOC100272685
zma-u.5	100283273	uncharacterized LOC100283273
tae-r.2	123068698	translocon-associated protein subunit beta
tae-r.2	123077209	translocon-associated protein subunit beta
tae-r.2	123060204	translocon-associated protein subunit beta
hvu-r.1	123442740	translocon-associated protein subunit beta
sbi-r.1	110429913	translocon-associated protein subunit beta
bdi-r.1	100840423	translocon-associated protein subunit beta
bdi-r.1	100822025	translocon-associated protein subunit beta

Top 50 coexpressed genes to 102594422 (sot-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 102594422 (sot-r.1 coexpression data)

CoexMap"102594422"

[Cytoscape]

Annotation

functional annotation

KEGG

sot04141 [list] [network] Protein processing in endoplasmic reticulum (261 genes)

GO BP

GO CC

GO:0005783 [list] [network] endoplasmic reticulum

(475 genes)

IEA

GO MF

Protein

XP_006363969.1 [sequence] [blastp]

Subcellular
localization
wolf

extr 4, cyto 2, chlo 1, mito 1, vacu 1, chlo_mito 1

(predict for XP_006363969.1)

Subcellular
localization
TargetP

scret 9

(predict for XP_006363969.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sot-r.1 for 102594422	sot-r.1 for 102586746	sly-u.5 for 101259897	nta-r.1 for 107801583	nta-r.1 for 107789931	nta-r.1 for 107816303	ath-u.5 for AT5G14030	gma-u.5 for 100500066	gma-u.5 for 100306406	bra-r.6 for 103850914	bra-r.6 for 103854291	bra-r.6 for 103856052	vvi-u.5 for 100244388	vvi-u.5 for 100241257	ppo-u.5 for 7461631	ppo-u.5 for 18107126	mtr-u.5 for 11443082	ghi-r.1 for 107893240	ghi-r.1 for 107897297	ghi-r.1 for 107912376	bna-r.1 for 106347728	bna-r.1 for 106372248	bna-r.1 for 106402232	cit-r.1 for 102615464	osa-u.5 for 4326440	osa-u.5 for 4337538	zma-u.5 for 100272685	zma-u.5 for 100283273	tae-r.2 for 123068698	tae-r.2 for 123077209	tae-r.2 for 123060204	hvu-r.1 for 123442740	sbi-r.1 for 110429913	bdi-r.1 for 100840423	bdi-r.1 for 100822025

Ortholog

Ortholog ID: 3839

Species

sot

sly

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

translocon-associated protein subunit beta-like

uncharacterized LOC101259897

uncharacterized LOC107789931

uncharacterized LOC107816303

uncharacterized LOC107808814

translocon-associated protein beta (TRAPB) family protein

translocon-associated protein subunit beta-like

uncharacterized LOC100306406

translocon-associated protein subunit beta

uncharacterized LOC100244388

uncharacterized LOC100241257

uncharacterized LOC7461631

uncharacterized LOC18107126

translocon-associated protein subunit beta

uncharacterized LOC107888437

translocon-associated protein subunit beta

translocon-associated protein subunit beta-like

uncharacterized LOC102615464

uncharacterized LOC4326440

uncharacterized LOC4337538

uncharacterized LOC100272685

uncharacterized LOC100283273

translocon-associated protein subunit beta

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03050	Proteasome	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04141	Protein processing in endoplasmic reticulum	11
sot00510	N-Glycan biosynthesis	5
sot00513	Various types of N-glycan biosynthesis	5
sot03060	Protein export	4
sot04145	Phagosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04141	Protein processing in endoplasmic reticulum	7
sly03060	Protein export	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	2
nta03010	Ribosome	2
nta00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	9
nta04145	Phagosome	4
nta04142	Lysosome	2
nta00190	Oxidative phosphorylation	2
nta04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	8
ath00510	N-Glycan biosynthesis	3
ath00513	Various types of N-glycan biosynthesis	3
ath04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	8
gma03060	Protein export	4
gma04145	Phagosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	11
gma04145	Phagosome	6
gma03060	Protein export	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04141	Protein processing in endoplasmic reticulum	8
bra03060	Protein export	5
bra04145	Phagosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04141	Protein processing in endoplasmic reticulum	8
bra04145	Phagosome	6
bra03060	Protein export	5
bra04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04141	Protein processing in endoplasmic reticulum	7
bra03060	Protein export	4
bra04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	13
vvi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	14
vvi04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04141	Protein processing in endoplasmic reticulum	12
ppo04145	Phagosome	3
ppo03060	Protein export	2
ppo04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04141	Protein processing in endoplasmic reticulum	11
ppo00190	Oxidative phosphorylation	2
ppo03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	7
mtr00510	N-Glycan biosynthesis	4
mtr00513	Various types of N-glycan biosynthesis	4
mtr03050	Proteasome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00900	Terpenoid backbone biosynthesis	3
ghi03013	Nucleocytoplasmic transport	2
ghi00600	Sphingolipid metabolism	2
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00100	Steroid biosynthesis	4
ghi00940	Phenylpropanoid biosynthesis	3
ghi00905	Brassinosteroid biosynthesis	2
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	12
ghi04141	Protein processing in endoplasmic reticulum	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04141	Protein processing in endoplasmic reticulum	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04141	Protein processing in endoplasmic reticulum	5
bna04146	Peroxisome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04141	Protein processing in endoplasmic reticulum	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00020	Citrate cycle (TCA cycle)	2
cit00640	Propanoate metabolism	2
cit01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04141	Protein processing in endoplasmic reticulum	6
osa03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	11
osa04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	6
zma03060	Protein export	3
zma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	7
zma03060	Protein export	4
zma04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	6
tae03060	Protein export	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	6
tae03060	Protein export	3
tae00100	Steroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	6
tae03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04141	Protein processing in endoplasmic reticulum	6
hvu00520	Amino sugar and nucleotide sugar metabolism	3
hvu00020	Citrate cycle (TCA cycle)	2
hvu00710	Carbon fixation by Calvin cycle	2
hvu01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	7
sbi04120	Ubiquitin mediated proteolysis	2
sbi03060	Protein export	2
sbi04145	Phagosome	2
sbi00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04141	Protein processing in endoplasmic reticulum	8
bdi03060	Protein export	4
bdi00510	N-Glycan biosynthesis	3
bdi00513	Various types of N-glycan biosynthesis	3
bdi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04141	Protein processing in endoplasmic reticulum	8
bdi03060	Protein export	5
bdi00510	N-Glycan biosynthesis	2
bdi00513	Various types of N-glycan biosynthesis	2
bdi04145	Phagosome	2

Expression

Expression pattern

Entrez Gene ID^*

102594422

102586746

101259897

107789931

107816303

107808814

831251

100500066

100306406

103850914

103856052

103846518

100244388

100241257

7461631

18107126

11443082

107937118

107888437

107914015

106372248

106431306

125593122

102615464

4326440

4337538

100272685

100283273

123068698

123077209

123060204

123442740

110429913

100840423

100822025

The preparation time of this page was 0.2 [sec].


Species	sot	sly	nta	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	2	1	3	1	2	3	2	2	1	3	3	1	2	2	3	1	1	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 102594422 (sot-r.1 coexpression data)

Top 50 enrichment test to 102594422 (sot-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**