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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102596329   pentatricopeptide repeat-containing protein At1g02370, mitochondrial 
 sly-u.5   101264458   pentatricopeptide repeat-containing protein At1g02370, mitochondrial 
 nta-r.1   107791420   pentatricopeptide repeat-containing protein At1g02370, mitochondrial-like 
 nta-r.1   107792462   pentatricopeptide repeat-containing protein At1g02370, mitochondrial-like 
 nta-r.1   107791421   pentatricopeptide repeat-containing protein At1g02370, mitochondrial-like 
 ath-u.5   AT4G01990   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-u.5   AT1G02370   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100791769   pentatricopeptide repeat-containing protein At1g02370, mitochondrial 
 gma-u.5   100781679   pentatricopeptide repeat-containing protein At1g02370, mitochondrial 
 bra-r.6   103844591   pentatricopeptide repeat-containing protein At1g02370, mitochondrial 
 bra-r.6   103858787   pentatricopeptide repeat-containing protein At4g01990, mitochondrial 
 vvi-u.5   100243538   pentatricopeptide repeat-containing protein At1g02370, mitochondrial 
 mtr-u.5   11414882   pentatricopeptide repeat-containing protein At1g02370, mitochondrial 
 ghi-r.1   107926850   pentatricopeptide repeat-containing protein At1g02370, mitochondrial 
 bna-r.1   106438655   pentatricopeptide repeat-containing protein At4g01990, mitochondrial-like 
 bna-r.1   106370915   pentatricopeptide repeat-containing protein At1g02370, mitochondrial 
 bna-r.1   106388798   pentatricopeptide repeat-containing protein At4g01990, mitochondrial-like 
 cit-r.1   102611297   pentatricopeptide repeat-containing protein At1g02370, mitochondrial 
 osa-u.5   4325785   pentatricopeptide repeat-containing protein At4g01990, mitochondrial 
 osa-u.5   4325781   pentatricopeptide repeat-containing protein At4g01990, mitochondrial 
 zma-u.5   103635083   pentatricopeptide repeat-containing protein, mitochondrial-like 
 tae-r.2   123143572   uncharacterized LOC123143572 
 tae-r.2   123055160   pentatricopeptide repeat-containing protein At4g01990, mitochondrial 
 tae-r.2   123132026   pentatricopeptide repeat-containing protein At4g01990, mitochondrial 
 hvu-r.1   123428373   pentatricopeptide repeat-containing protein At4g01990, mitochondrial-like 
 hvu-r.1   123401981   pentatricopeptide repeat-containing protein At4g01990, mitochondrial-like 
 hvu-r.1   123401980   pentatricopeptide repeat-containing protein At4g01990, mitochondrial-like 
 sbi-r.1   8060320   pentatricopeptide repeat-containing protein At4g01990, mitochondrial 
 bdi-r.1   100829795   pentatricopeptide repeat-containing protein At4g01990, mitochondrial 
 bdi-r.1   100846115   pentatricopeptide repeat-containing protein At4g01990, mitochondrial 

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Top 50 coexpressed genes to 102596329 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102596329 (sot-r.1 coexpression data)

CoexMap"102596329"


sotLOC102596329 | Entrez gene ID : 102596329      
Species sot sly nta ath gma bra vvi mtr ghi bna cit osa zma tae hvu sbi bdi cre ppo
Paralog 1 1 3 2 2 2 1 1 1 3 1 2 1 3 3 1 2 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (603 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4214 genes)  IEA  
Protein XP_006349176.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  nucl 4,  cyto_mito 2,  chlo 1  (predict for XP_006349176.1)
Subcellular
localization
TargetP
mito 9  (predict for XP_006349176.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102596329
sly-u.5
for
101264458
nta-r.1
for
107791420
nta-r.1
for
107792462
nta-r.1
for
107791421
ath-u.5
for
AT4G01990
ath-u.5
for
AT1G02370
gma-u.5
for
100791769
gma-u.5
for
100781679
bra-r.6
for
103844591
bra-r.6
for
103858787
vvi-u.5
for
100243538
mtr-u.5
for
11414882
ghi-r.1
for
107926850
bna-r.1
for
106438655
bna-r.1
for
106370915
bna-r.1
for
106388798
cit-r.1
for
102611297
osa-u.5
for
4325785
osa-u.5
for
4325781
zma-u.5
for
103635083
tae-r.2
for
123143572
tae-r.2
for
123055160
tae-r.2
for
123132026
hvu-r.1
for
123428373
hvu-r.1
for
123401981
hvu-r.1
for
123401980
sbi-r.1
for
8060320
bdi-r.1
for
100829795
bdi-r.1
for
100846115


Ortholog ID: 3482
Species sot sly nta nta nta ath ath gma gma bra bra vvi mtr ghi bna bna bna cit osa osa zma tae tae hvu hvu hvu sbi bdi bdi
Symbol LOC102596329 LOC101264458 LOC107791420 LOC107791421 LOC107774508 AT4G01990 AT1G02370 LOC100791769 LOC100781679 LOC103844591 LOC103858787 LOC100243538 LOC11414882 LOC107926850 LOC106370915 LOC106388798 LOC106397171 LOC102611297 LOC4325785 LOC4325781 LOC103635083 LOC123055160 LOC123055157 LOC123428373 LOC123401978 LOC123428376 LOC8060320 LOC100829795 LOC100846115
Function* pentatricopeptide repeat-containing protein At1g02370, mitochondrial pentatricopeptide repeat-containing protein At1g02370, mitochondrial pentatricopeptide repeat-containing protein At1g02370, mitochondrial-like pentatricopeptide repeat-containing protein At1g02370, mitochondrial-like pentatricopeptide repeat-containing protein At1g02370, mitochondrial-like Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At1g02370, mitochondrial pentatricopeptide repeat-containing protein At1g02370, mitochondrial pentatricopeptide repeat-containing protein At1g02370, mitochondrial pentatricopeptide repeat-containing protein At4g01990, mitochondrial pentatricopeptide repeat-containing protein At1g02370, mitochondrial pentatricopeptide repeat-containing protein At1g02370, mitochondrial pentatricopeptide repeat-containing protein At1g02370, mitochondrial pentatricopeptide repeat-containing protein At1g02370, mitochondrial pentatricopeptide repeat-containing protein At4g01990, mitochondrial-like pentatricopeptide repeat-containing protein At1g02370, mitochondrial-like pentatricopeptide repeat-containing protein At1g02370, mitochondrial pentatricopeptide repeat-containing protein At4g01990, mitochondrial pentatricopeptide repeat-containing protein At4g01990, mitochondrial pentatricopeptide repeat-containing protein, mitochondrial-like pentatricopeptide repeat-containing protein At4g01990, mitochondrial pentatricopeptide repeat-containing protein At4g01990, mitochondrial pentatricopeptide repeat-containing protein At4g01990, mitochondrial-like pentatricopeptide repeat-containing protein At4g01990, mitochondrial-like pentatricopeptide repeat-containing protein At4g01990, mitochondrial-like pentatricopeptide repeat-containing protein At4g01990, mitochondrial pentatricopeptide repeat-containing protein At4g01990, mitochondrial pentatricopeptide repeat-containing protein At4g01990, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 2
sly03020 RNA polymerase 2
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
gma03018 RNA degradation 2
gma03010 Ribosome 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00261 Monobactam biosynthesis 2
bra00300 Lysine biosynthesis 2
bra01230 Biosynthesis of amino acids 2
bra03008 Ribosome biogenesis in eukaryotes 2
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 6
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 2
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
bna03013 Nucleocytoplasmic transport 2
bna04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
bna03013 Nucleocytoplasmic transport 2
bna04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 2
osa03440 Homologous recombination 2
osa03008 Ribosome biogenesis in eukaryotes 2
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 4
hvu03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 6
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102596329 101264458 107791420 107791421 107774508 828172 837735 100791769 100781679 103844591 103858787 100243538 11414882 107926850 106370915 106388798 106397171 102611297 4325785 4325781 103635083 123055160 123055157 123428373 123401978 123428376 8060320 100829795 100846115
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