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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102602117   THO complex subunit 7A-like 
 sot-r.1   102592509   THO complex subunit 7A-like 
 sly-u.5   101268064   THO complex subunit 7A 
 sly-u.5   101254930   THO complex subunit 7A 
 nta-r.1   107816187   THO complex subunit 7A 
 nta-r.1   107798376   THO complex subunit 7A 
 nta-r.1   107775328   THO complex subunit 7A 
 ath-u.5   THO7   Tho complex subunit 7/Mft1p 
 ath-u.5   THO7   Tho complex subunit 7/Mft1p 
 gma-u.5   100783192   THO complex subunit 7A 
 gma-u.5   100305782   uncharacterized LOC100305782 
 bra-r.6   103855121   THO complex subunit 7B 
 vvi-u.5   100256436   THO complex subunit 7A 
 ppo-u.5   7493911   THO complex subunit 7A 
 ppo-u.5   18104189   THO complex subunit 7A 
 mtr-u.5   11441838   THO complex subunit 7A 
 ghi-r.1   107924564   THO complex subunit 7A 
 ghi-r.1   107950546   THO complex subunit 7A 
 bna-r.1   106435949   THO complex subunit 7B 
 cit-r.1   102624504   THO complex subunit 7B 
 osa-u.5   4339657   THO complex subunit 7A 
 osa-u.5   4344717   THO complex subunit 7B 
 zma-u.5   103631020   THO complex subunit 7B 
 zma-u.5   100283954   ngg1 interacting factor 3 like 1 binding protein 1 
 tae-r.2   123143492   THO complex subunit 7B 
 tae-r.2   123136021   THO complex subunit 7B 
 tae-r.2   123131971   THO complex subunit 7B 
 hvu-r.1   123402630   THO complex subunit 7B 
 sbi-r.1   8077975   THO complex subunit 7B 
 bdi-r.1   100834629   THO complex subunit 7B 
 bdi-r.1   100831686   THO complex subunit 7B 
 cre-r.1   CHLRE_03g182350v5   uncharacterized protein 

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Top 50 coexpressed genes to 102602117 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102602117 (sot-r.1 coexpression data)

CoexMap"102602117"


sotLOC102602117 | Entrez gene ID : 102602117      
Species sot sly nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 2 2 3 2 2 1 1 2 1 2 1 1 2 2 3 1 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sot03013 [list] [network] Nucleocytoplasmic transport (112 genes)
sot03040 [list] [network] Spliceosome (223 genes)
GO BP
GO:0006406 [list] [network] mRNA export from nucleus  (29 genes)  IEA  
GO:0006397 [list] [network] mRNA processing  (205 genes)  IEA  
GO CC
GO:0000445 [list] [network] THO complex part of transcription export complex  (6 genes)  IEA  
GO MF
Protein XP_006362736.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 4  (predict for XP_006362736.1)
Subcellular
localization
TargetP
other 7,  mito 3  (predict for XP_006362736.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102602117
sot-r.1
for
102592509
sly-u.5
for
101268064
sly-u.5
for
101254930
nta-r.1
for
107816187
nta-r.1
for
107798376
nta-r.1
for
107775328
ath-u.5
for
THO7
ath-u.5
for
THO7
gma-u.5
for
100783192
gma-u.5
for
100305782
bra-r.6
for
103855121
vvi-u.5
for
100256436
ppo-u.5
for
7493911
ppo-u.5
for
18104189
mtr-u.5
for
11441838
ghi-r.1
for
107924564
ghi-r.1
for
107950546
bna-r.1
for
106435949
cit-r.1
for
102624504
osa-u.5
for
4339657
osa-u.5
for
4344717
zma-u.5
for
103631020
zma-u.5
for
100283954
tae-r.2
for
123143492
tae-r.2
for
123136021
tae-r.2
for
123131971
hvu-r.1
for
123402630
sbi-r.1
for
8077975
bdi-r.1
for
100834629
bdi-r.1
for
100831686
cre-r.1
for
CHLRE_03g182350v5


Ortholog ID: 6268
Species sot sot sly sly nta nta nta ath ath gma gma bra vvi ppo ppo mtr ghi ghi bna cit osa osa zma zma tae tae tae hvu sbi bdi bdi cre
Symbol LOC102602117 LOC102592509 LOC101268064 LOC101254930 LOC107798376 LOC107775328 LOC107759617 THO7 THO7 LOC100783192 LOC100305782 LOC103855121 LOC100256436 LOC7493911 LOC18104189 LOC11441838 LOC107924564 LOC107950546 LOC106435949 LOC102624504 LOC4339657 LOC4344717 LOC103631020 LOC100283954 LOC123143492 LOC123136021 LOC123131971 LOC123402630 LOC8077975 LOC100834629 LOC100831686 CHLRE_03g182350v5
Function* THO complex subunit 7A-like THO complex subunit 7A-like THO complex subunit 7A THO complex subunit 7A THO complex subunit 7A THO complex subunit 7A THO complex subunit 7A-like Tho complex subunit 7/Mft1p Tho complex subunit 7/Mft1p THO complex subunit 7A uncharacterized LOC100305782 THO complex subunit 7B THO complex subunit 7A THO complex subunit 7A THO complex subunit 7A THO complex subunit 7A THO complex subunit 7A THO complex subunit 7A THO complex subunit 7B THO complex subunit 7B THO complex subunit 7A THO complex subunit 7B THO complex subunit 7B ngg1 interacting factor 3 like 1 binding protein 1 THO complex subunit 7B THO complex subunit 7B THO complex subunit 7B THO complex subunit 7B THO complex subunit 7B THO complex subunit 7B THO complex subunit 7B uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
sot03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot03013 Nucleocytoplasmic transport 2
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
sly03013 Nucleocytoplasmic transport 2
sly03020 RNA polymerase 2
sly03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta03040 Spliceosome 2
nta04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 11
nta00190 Oxidative phosphorylation 4
nta03013 Nucleocytoplasmic transport 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta03040 Spliceosome 2
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03020 RNA polymerase 2
gma03420 Nucleotide excision repair 2
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 11
gma03020 RNA polymerase 2
gma03013 Nucleocytoplasmic transport 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 4
bra03013 Nucleocytoplasmic transport 3
bra03040 Spliceosome 3
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo03013 Nucleocytoplasmic transport 3
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
bna03015 mRNA surveillance pathway 2
bna03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
cit03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 3
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03040 Spliceosome 3
tae04626 Plant-pathogen interaction 3
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03040 Spliceosome 3
tae04626 Plant-pathogen interaction 3
tae03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03040 Spliceosome 3
tae04626 Plant-pathogen interaction 3
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
sbi03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 8
bdi03040 Spliceosome 3
bdi03013 Nucleocytoplasmic transport 2
bdi03020 RNA polymerase 2
bdi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 6
bdi03013 Nucleocytoplasmic transport 3
bdi04141 Protein processing in endoplasmic reticulum 2
bdi03040 Spliceosome 2
bdi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 11
cre03018 RNA degradation 2
cre03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102602117 102592509 101268064 101254930 107798376 107775328 107759617 821174 831542 100783192 100305782 103855121 100256436 7493911 18104189 11441838 107924564 107950546 106435949 102624504 4339657 4344717 103631020 100283954 123143492 123136021 123131971 123402630 8077975 100834629 100831686 5728490
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