ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sot-r.1	102604791	uncharacterized LOC102604791
sot-r.1	102580705	uncharacterized LOC102580705
sot-r.1	102591618	uncharacterized LOC102591618
sot-r.1	102591290	uncharacterized LOC102591290
sly-u.5	101257950	uncharacterized LOC101257950
sly-u.5	101263341	uncharacterized LOC101263341
nta-r.1	107820480	uncharacterized LOC107820480
nta-r.1	107805966	uncharacterized LOC107805966
nta-r.1	107782604	uncharacterized LOC107782604
ath-u.5	AT3G18295	DUF1639 family protein, putative (DUF1639)
ath-u.5	AT4G17440	chromogranin (DUF1639)
ath-u.5	AT1G25370	hypothetical protein (DUF1639)
gma-u.5	100779683	uncharacterized LOC100779683
gma-u.5	100782256	uncharacterized LOC100782256
bra-r.6	103831248	uncharacterized LOC103831248
bra-r.6	103829148	uncharacterized LOC103829148
bra-r.6	103838123	uncharacterized LOC103838123
vvi-u.5	100853295	uncharacterized LOC100853295
ppo-u.5	7482846	uncharacterized LOC7482846
ppo-u.5	7466890	uncharacterized LOC7466890
ppo-u.5	7486760	uncharacterized LOC7486760
ghi-r.1	107929391	uncharacterized LOC107929391
ghi-r.1	107946214	uncharacterized LOC107946214
ghi-r.1	107886059	uncharacterized LOC107886059
bna-r.1	106445074	uncharacterized LOC106445074
bna-r.1	125594527	uncharacterized LOC125594527
bna-r.1	111206997	uncharacterized LOC111206997
cit-r.1	102618144	uncharacterized LOC102618144
cit-r.1	102623112	hypothetical protein
osa-u.5	112936200	uncharacterized LOC112936200
osa-u.5	4339534	uncharacterized LOC4339534
osa-u.5	4327940	uncharacterized LOC4327940
zma-u.5	103635296	serine/arginine repetitive matrix protein 1
zma-u.5	100275175	DUF1639 family protein
zma-u.5	103630989	uncharacterized LOC103630989
tae-r.2	123070529	uncharacterized LOC123070529
tae-r.2	123180663	basic proline-rich protein
hvu-r.1	123440115	uncharacterized LOC123440115
hvu-r.1	123418299	cell division protein ZipA-like
hvu-r.1	123440113	uncharacterized LOC123440113
sbi-r.1	8074558	formin-like protein 18
sbi-r.1	8068036	uncharacterized LOC8068036
sbi-r.1	8063082	protein SCARECROW 1
bdi-r.1	100846507	formin-like protein 15
bdi-r.1	100837073	formin-like protein 14
bdi-r.1	100836244	ras/Rap GTPase-activating protein SynGAP

Top 50 coexpressed genes to 102604791 (sot-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 102604791 (sot-r.1 coexpression data)

CoexMap"102604791"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_006359254.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 8, nucl 1

(predict for XP_006359254.1)

Subcellular
localization
TargetP

chlo 7

(predict for XP_006359254.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sot-r.1 for 102604791	sot-r.1 for 102580705	sot-r.1 for 102591618	sot-r.1 for 102591290	sly-u.5 for 101257950	sly-u.5 for 101263341	nta-r.1 for 107820480	nta-r.1 for 107805966	nta-r.1 for 107782604	ath-u.5 for AT3G18295	ath-u.5 for AT4G17440	ath-u.5 for AT1G25370	gma-u.5 for 100779683	gma-u.5 for 100782256	bra-r.6 for 103831248	bra-r.6 for 103829148	bra-r.6 for 103838123	vvi-u.5 for 100853295	ppo-u.5 for 7482846	ppo-u.5 for 7466890	ppo-u.5 for 7486760	ghi-r.1 for 107929391	ghi-r.1 for 107946214	ghi-r.1 for 107886059	bna-r.1 for 106445074	bna-r.1 for 125594527	bna-r.1 for 111206997	cit-r.1 for 102618144	cit-r.1 for 102623112	osa-u.5 for 112936200	osa-u.5 for 4339534	osa-u.5 for 4327940	zma-u.5 for 103635296	zma-u.5 for 100275175	zma-u.5 for 103630989	tae-r.2 for 123070529	tae-r.2 for 123180663	hvu-r.1 for 123440115	hvu-r.1 for 123418299	hvu-r.1 for 123440113	sbi-r.1 for 8074558	sbi-r.1 for 8068036	sbi-r.1 for 8063082	bdi-r.1 for 100846507	bdi-r.1 for 100837073	bdi-r.1 for 100836244

Ortholog

Ortholog ID: 641

Species

sot

sly

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC102580705

uncharacterized LOC102591618

uncharacterized LOC102591290

uncharacterized LOC101257950

uncharacterized LOC101260633

uncharacterized LOC107805966

uncharacterized LOC107775314

uncharacterized LOC107775313

DUF1639 family protein, putative (DUF1639)

chromogranin (DUF1639)

hypothetical protein (DUF1639)

uncharacterized LOC100812835

inactive histone-lysine N-methyltransferase 2E

uncharacterized LOC103869577

uncharacterized LOC103835453

uncharacterized LOC100853295

uncharacterized LOC100259406

uncharacterized LOC109123925

uncharacterized LOC7482846

uncharacterized LOC7466890

uncharacterized LOC7486760

uncharacterized LOC11406897

uncharacterized LOC107929391

uncharacterized LOC121203041

digestive organ expansion factor homolog

uncharacterized LOC106445074

uncharacterized LOC106345254

uncharacterized LOC106382087

uncharacterized LOC102618144

hypothetical protein

uncharacterized LOC112936200

uncharacterized LOC4327940

uncharacterized LOC4327943

serine/arginine repetitive matrix protein 1

uncharacterized LOC111347728

DUF1639 family protein

formin-like protein 15

uncharacterized LOC123440115

cell division protein ZipA-like

uncharacterized LOC123440113

formin-like protein 18

protein SCARECROW 1

formin-like protein 15

formin-like protein 14

ras/Rap GTPase-activating protein SynGAP

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00071	Fatty acid degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04016	MAPK signaling pathway - plant	2
nta04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03015	mRNA surveillance pathway	3
ath03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00450	Selenocompound metabolism	2
gma03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	3
bra04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04120	Ubiquitin mediated proteolysis	2
vvi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	3
ghi00010	Glycolysis / Gluconeogenesis	2
ghi00620	Pyruvate metabolism	2
ghi01200	Carbon metabolism	2
ghi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04130	SNARE interactions in vesicular transport	2
bna03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	2
cit04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04016	MAPK signaling pathway - plant	2
osa04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00564	Glycerophospholipid metabolism	3
tae00592	alpha-Linolenic acid metabolism	3
tae03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03420	Nucleotide excision repair	3
tae04120	Ubiquitin mediated proteolysis	3
tae04141	Protein processing in endoplasmic reticulum	3
tae03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00030	Pentose phosphate pathway	2
sbi00710	Carbon fixation by Calvin cycle	2
sbi01200	Carbon metabolism	2
sbi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04626	Plant-pathogen interaction	3
bdi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00500	Starch and sucrose metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

102580705

102591618

102591290

101257950

101260633

107805966

107775314

107775313

821358

827455

841299

100812835

100779063

103869577

103835453

100853295

100259406

109123925

7482846

7466890

7486760

11406897

107929391

121203041

121219889

106445074

106345254

106382087

102618144

102623112

112936200

4327940

4327943

103635296

111347728

100273686

123078940

123058493

123440115

123418299

123440113

8074558

8063082

100846507

100837073

100836244

The preparation time of this page was 0.2 [sec].


Species	sot	sly	nta	ath	gma	bra	vvi	ppo	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre	mtr
Paralog	4	2	3	3	2	3	1	3	3	3	2	3	3	2	3	3	3	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 102604791 (sot-r.1 coexpression data)

Top 50 enrichment test to 102604791 (sot-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**