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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   107062230   pentatricopeptide repeat-containing protein DOT4, chloroplastic-like 
 nta-r.1   107798734   pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like 
 nta-r.1   107811120   pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like 
 vvi-u.5   100251608   putative pentatricopeptide repeat-containing protein At3g01580 
 ghi-r.1   107943229   pentatricopeptide repeat-containing protein At2g20540 

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Top 50 coexpressed genes to 107062230 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107062230 (sot-r.1 coexpression data)

CoexMap"107062230"


sotLOC107062230 | Entrez gene ID : 107062230    
Species sot nta vvi ghi sbi osa gma sly cit mtr bra tae ath bna hvu ppo zma cre bdi
Paralog 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (4917 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1335 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4214 genes)  IEA  
Protein XP_015168109.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  chlo_mito 4,  chlo 3,  nucl 1  (predict for XP_015168109.1)
Subcellular
localization
TargetP
mito 3,  other 3  (predict for XP_015168109.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
107062230
nta-r.1
for
107798734
nta-r.1
for
107811120
vvi-u.5
for
100251608
ghi-r.1
for
107943229


Ortholog ID: 18826
Species sot nta nta vvi ghi
Symbol LOC107062230 LOC107798734 LOC107811120 LOC100251608 LOC107943229
Function* pentatricopeptide repeat-containing protein DOT4, chloroplastic-like pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like putative pentatricopeptide repeat-containing protein At3g01580 pentatricopeptide repeat-containing protein At2g20540
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00960 Tropane, piperidine and pyridine alkaloid biosynthesis 3
ghi03018 RNA degradation 2
ghi03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107062230 107798734 107811120 100251608 107943229
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