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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107889407   tRNA-uridine aminocarboxypropyltransferase 2 
 ghi-r.1   107891317   tRNA-uridine aminocarboxypropyltransferase 2 
 bra-r.6   103866585   DTW domain-containing protein 2 
 bna-r.1   106396404   tRNA-uridine aminocarboxypropyltransferase 2 
 bna-r.1   125608889   tRNA-uridine aminocarboxypropyltransferase 2-like 
 cit-r.1   102616316   uncharacterized LOC102616316 
 gma-u.5   100816233   tRNA-uridine aminocarboxypropyltransferase 2 
 vvi-u.5   100250284   tRNA-uridine aminocarboxypropyltransferase A 
 ppo-u.5   7473622   uncharacterized LOC7473622 
 mtr-u.5   25499015   tRNA-uridine aminocarboxypropyltransferase 2 
 sly-u.5   101261564   tRNA-uridine aminocarboxypropyltransferase A 
 sot-r.1   102596928   DTW domain-containing protein 2 
 nta-r.1   107777809   tRNA-uridine aminocarboxypropyltransferase A 
 nta-r.1   107819776   tRNA-uridine aminocarboxypropyltransferase A 
 osa-u.5   4349753   tRNA-uridine aminocarboxypropyltransferase A 
 osa-u.5   4351476   tRNA-uridine aminocarboxypropyltransferase A 
 zma-u.5   100280375   uncharacterized LOC100280375 
 tae-r.2   123111213   tRNA-uridine aminocarboxypropyltransferase 2 
 hvu-r.1   123397888   tRNA-uridine aminocarboxypropyltransferase 2 
 sbi-r.1   8070347   DTW domain-containing protein 2 
 bdi-r.1   100829855   DTW domain-containing protein 2 
 cre-r.1   CHLRE_16g673169v5   uncharacterized protein 

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Top 50 coexpressed genes to 107889407 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107889407 (ghi-r.1 coexpression data)

CoexMap"107889407"


ghiLOC107889407 | Entrez gene ID : 107889407    
Species ghi bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre ath
Paralog 2 1 2 1 1 1 1 1 1 1 2 2 1 1 1 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_016669303.2 [sequence] [blastp]
XP_016669304.2 [sequence] [blastp]
XP_016669305.2 [sequence] [blastp]
XP_040932510.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 4,  chlo 1,  extr 1,  cysk 1  (predict for XP_016669303.2)
nucl 4,  cyto 4,  chlo 1,  extr 1,  cysk 1  (predict for XP_016669304.2)
nucl 4,  cyto 4,  chlo 1,  extr 1,  cysk 1  (predict for XP_016669305.2)
cyto 4,  nucl 4,  chlo 1,  extr 1,  cysk 1  (predict for XP_040932510.1)
Subcellular
localization
TargetP
other 6,  chlo 5  (predict for XP_016669303.2)
other 6,  chlo 5  (predict for XP_016669304.2)
other 6,  chlo 5  (predict for XP_016669305.2)
other 6,  chlo 5  (predict for XP_040932510.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107889407
ghi-r.1
for
107891317
bra-r.6
for
103866585
bna-r.1
for
106396404
bna-r.1
for
125608889
cit-r.1
for
102616316
gma-u.5
for
100816233
vvi-u.5
for
100250284
ppo-u.5
for
7473622
mtr-u.5
for
25499015
sly-u.5
for
101261564
sot-r.1
for
102596928
nta-r.1
for
107777809
nta-r.1
for
107819776
osa-u.5
for
4349753
osa-u.5
for
4351476
zma-u.5
for
100280375
tae-r.2
for
123111213
hvu-r.1
for
123397888
sbi-r.1
for
8070347
bdi-r.1
for
100829855
cre-r.1
for
CHLRE_16g673169v5


Ortholog ID: 10042
Species ghi ghi bra bna bna cit gma vvi ppo mtr sly sot nta nta osa osa zma tae hvu sbi bdi cre
Symbol LOC107889407 LOC107891317 LOC103866585 LOC106396404 LOC125608889 LOC102616316 LOC100816233 LOC100250284 LOC7473622 LOC25499015 LOC101261564 LOC102596928 LOC107777809 LOC107819776 LOC4349753 LOC4351476 LOC100280375 LOC123111213 LOC123397888 LOC8070347 LOC100829855 CHLRE_16g673169v5
Function* tRNA-uridine aminocarboxypropyltransferase 2 tRNA-uridine aminocarboxypropyltransferase 2 DTW domain-containing protein 2 tRNA-uridine aminocarboxypropyltransferase 2 tRNA-uridine aminocarboxypropyltransferase 2-like uncharacterized LOC102616316 tRNA-uridine aminocarboxypropyltransferase 2 tRNA-uridine aminocarboxypropyltransferase A uncharacterized LOC7473622 tRNA-uridine aminocarboxypropyltransferase 2 tRNA-uridine aminocarboxypropyltransferase A DTW domain-containing protein 2 tRNA-uridine aminocarboxypropyltransferase A tRNA-uridine aminocarboxypropyltransferase A tRNA-uridine aminocarboxypropyltransferase A tRNA-uridine aminocarboxypropyltransferase A uncharacterized LOC100280375 tRNA-uridine aminocarboxypropyltransferase 2 tRNA-uridine aminocarboxypropyltransferase 2 DTW domain-containing protein 2 DTW domain-containing protein 2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 4
ghi03410 Base excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03022 Basal transcription factors 3
sot03013 Nucleocytoplasmic transport 2
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00750 Vitamin B6 metabolism 6
tae01240 Biosynthesis of cofactors 6
tae00650 Butanoate metabolism 4
tae00010 Glycolysis / Gluconeogenesis 3
tae00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107889407 107891317 103866585 106396404 125608889 102616316 100816233 100250284 7473622 25499015 101261564 102596928 107777809 107819776 4349753 4351476 100280375 123111213 123397888 8070347 100829855 5721379
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