ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107890997	uncharacterized LOC107890997
ghi-r.1	107950227	uncharacterized LOC107950227
ghi-r.1	107886039	uncharacterized LOC107886039
ghi-r.1	107889743	uncharacterized LOC107889743
ath-u.5	AT2G29510	hypothetical protein (DUF3527)
ath-u.5	AT5G01030	enolase, putative (DUF3527)
ath-u.5	AT5G59020	hepatocyte growth factor activator, putative (DUF3527)
bra-r.6	103845328	uncharacterized LOC103845328
bra-r.6	103851769	uncharacterized LOC103851769
bna-r.1	125609437	uncharacterized LOC125609437
bna-r.1	106451527	uncharacterized LOC106451527
bna-r.1	106451509	uncharacterized LOC106451509
cit-r.1	102625271	uncharacterized LOC102625271
cit-r.1	102622198	uncharacterized LOC102622198
gma-u.5	102665747	uncharacterized LOC102665747
gma-u.5	100789408	uncharacterized LOC100789408
gma-u.5	100798889	uncharacterized LOC100798889
vvi-u.5	100245981	uncharacterized LOC100245981
vvi-u.5	104879538	uncharacterized LOC104879538
ppo-u.5	7468598	uncharacterized LOC7468598
ppo-u.5	7468026	uncharacterized LOC7468026
ppo-u.5	7468841	uncharacterized LOC7468841
mtr-u.5	25498645	uncharacterized LOC25498645
mtr-u.5	25492560	uncharacterized LOC25492560
mtr-u.5	25491542	uncharacterized LOC25491542
sly-u.5	101262946	uncharacterized LOC101262946
sly-u.5	101263914	uncharacterized LOC101263914
sot-r.1	102579113	uncharacterized LOC102579113
nta-r.1	107813975	uncharacterized LOC107813975
nta-r.1	107810531	uncharacterized LOC107810531
nta-r.1	107780221	uncharacterized LOC107780221
osa-u.5	4332366	uncharacterized LOC4332366
zma-u.5	103639319	DUF3527 domain protein
zma-u.5	100194401	uncharacterized LOC100194401
tae-r.2	123092636	uncharacterized LOC123092636
tae-r.2	123085399	uncharacterized LOC123085399
tae-r.2	123097946	uncharacterized LOC123097946
hvu-r.1	123449054	uncharacterized LOC123449054
sbi-r.1	8081524	uncharacterized LOC8081524
bdi-r.1	100841371	uncharacterized LOC100841371

Top 50 coexpressed genes to 107890997 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107890997 (ghi-r.1 coexpression data)

CoexMap"107890997"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_016671104.2 [sequence] [blastp]
XP_040956925.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 7, cyto_nucl 4, vacu 1, pero 1, cysk 1	(predict for XP_016671104.2)
nucl 7, cyto_nucl 4, vacu 1, pero 1, cysk 1	(predict for XP_040956925.1)

Subcellular
localization
TargetP

chlo 6, other 4	(predict for XP_016671104.2)
chlo 6, other 4	(predict for XP_040956925.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107890997	ghi-r.1 for 107950227	ghi-r.1 for 107886039	ghi-r.1 for 107889743	ath-u.5 for AT2G29510	ath-u.5 for AT5G01030	ath-u.5 for AT5G59020	bra-r.6 for 103845328	bra-r.6 for 103851769	bna-r.1 for 125609437	bna-r.1 for 106451527	bna-r.1 for 106451509	cit-r.1 for 102625271	cit-r.1 for 102622198	gma-u.5 for 102665747	gma-u.5 for 100789408	gma-u.5 for 100798889	vvi-u.5 for 100245981	vvi-u.5 for 104879538	ppo-u.5 for 7468598	ppo-u.5 for 7468026	ppo-u.5 for 7468841	mtr-u.5 for 25498645	mtr-u.5 for 25492560	mtr-u.5 for 25491542	sly-u.5 for 101262946	sly-u.5 for 101263914	sot-r.1 for 102579113	nta-r.1 for 107813975	nta-r.1 for 107810531	nta-r.1 for 107780221	osa-u.5 for 4332366	zma-u.5 for 103639319	zma-u.5 for 100194401	tae-r.2 for 123092636	tae-r.2 for 123085399	tae-r.2 for 123097946	hvu-r.1 for 123449054	sbi-r.1 for 8081524	bdi-r.1 for 100841371

Ortholog

Ortholog ID: 2452

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC107890997

uncharacterized LOC107889743

uncharacterized LOC107906590

hypothetical protein (DUF3527)

enolase, putative (DUF3527)

hepatocyte growth factor activator, putative (DUF3527)

uncharacterized LOC103855437

uncharacterized LOC103868030

uncharacterized LOC106427433

uncharacterized LOC106433284

uncharacterized LOC106435862

uncharacterized LOC102625271

uncharacterized LOC102622198

uncharacterized LOC102665747

uncharacterized LOC100818834

uncharacterized LOC102665809

uncharacterized LOC100245981

uncharacterized LOC104879538

uncharacterized LOC7468598

uncharacterized LOC7468841

uncharacterized LOC7478563

uncharacterized LOC25498645

uncharacterized LOC25492560

uncharacterized LOC25491542

uncharacterized LOC101262946

uncharacterized LOC101263914

uncharacterized LOC102579113

uncharacterized LOC107813975

uncharacterized LOC107780221

uncharacterized LOC107765762

uncharacterized LOC4332366

DUF3527 domain protein

uncharacterized LOC100194401

uncharacterized LOC123092636

uncharacterized LOC123085399

uncharacterized LOC123097946

uncharacterized LOC123449054

uncharacterized LOC8081524

uncharacterized LOC100841371

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00562	Inositol phosphate metabolism	3
gma04075	Plant hormone signal transduction	2
gma00564	Glycerophospholipid metabolism	2
gma00565	Ether lipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	3
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04145	Phagosome	4
ppo04517	IgSF CAM signaling	4
ppo04814	Motor proteins	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03083	Polycomb repressive complex	2
ppo04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00270	Cysteine and methionine metabolism	3
mtr04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04075	Plant hormone signal transduction	2

Expression

Expression pattern

Entrez Gene ID^*

107890997

107889743

107906590

817500

831730

836019

103855437

103868030

106427433

106433284

106435862

102625271

102622198

102665747

100818834

102665809

100245981

104879538

7468598

7468841

7478563

25498645

25492560

25491542

101262946

101263914

102579113

107813975

107780221

107765762

4332366

103639319

100194401

123092636

123085399

123097946

123449054

8081524

100841371

The preparation time of this page was 0.3 [sec].


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	2	3	2	3	2	3	3	2	1	3	1	2	3	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107890997 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107890997 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**