ATTED-II : GeneCoexpression result

Species	Gene	Description
ghi-r.1	107892264	protein RST1
ghi-r.1	107888663	protein RST1
ath-u.5	RST1	ARM repeat superfamily protein
bra-r.6	103875197	protein RST1
bna-r.1	111213031	protein RST1
bna-r.1	106349234	protein RST1
cit-r.1	102623696	protein RST1
gma-u.5	100775274	protein RST1
vvi-u.5	100245681	protein RST1
ppo-u.5	7490707	protein RST1
mtr-u.5	11418724	protein RST1
sly-u.5	101252252	protein RST1
sot-r.1	102601532	protein RST1
nta-r.1	107761038	protein RST1
nta-r.1	107807007	protein RST1
osa-u.5	4325197	protein RST1
zma-u.5	103649701	protein RST1
tae-r.2	123077286	protein RST1
tae-r.2	123068785	protein RST1
tae-r.2	123060274	protein RST1
hvu-r.1	123442809	protein RST1
sbi-r.1	8078488	protein RST1
bdi-r.1	100837770	protein RST1

Annotation

functional annotation

KEGG

GO BP

GO:0060147 [list] [network] regulation of post-transcriptional gene silencing

(4 genes)

IEA

GO CC

GO MF

Protein

XP_016672783.2 [sequence] [blastp]

Subcellular
localization
wolf

plas 6, vacu 1, E.R. 1, E.R._vacu 1

(predict for XP_016672783.2)

Subcellular
localization
TargetP

other 5

(predict for XP_016672783.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107892264	ghi-r.1 for 107888663	ath-u.5 for RST1	bra-r.6 for 103875197	bna-r.1 for 111213031	bna-r.1 for 106349234	cit-r.1 for 102623696	gma-u.5 for 100775274	vvi-u.5 for 100245681	ppo-u.5 for 7490707	mtr-u.5 for 11418724	sly-u.5 for 101252252	sot-r.1 for 102601532	nta-r.1 for 107761038	nta-r.1 for 107807007	osa-u.5 for 4325197	zma-u.5 for 103649701	tae-r.2 for 123077286	tae-r.2 for 123068785	tae-r.2 for 123060274	hvu-r.1 for 123442809	sbi-r.1 for 8078488	bdi-r.1 for 100837770

Ortholog

Ortholog ID: 11325

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

RST1

Function^*

protein RST1

ARM repeat superfamily protein

protein RST1

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04148	Efferocytosis	3
ghi03013	Nucleocytoplasmic transport	2
ghi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03013	Nucleocytoplasmic transport	8
ghi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03018	RNA degradation	4
bna04142	Lysosome	4
bna04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04142	Lysosome	4
bna04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04120	Ubiquitin mediated proteolysis	3
cit03018	RNA degradation	2
cit03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	4
gma04136	Autophagy - other	2
gma03082	ATP-dependent chromatin remodeling	2
gma03018	RNA degradation	2
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03460	Fanconi anemia pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04120	Ubiquitin mediated proteolysis	2
sly03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	2
nta00010	Glycolysis / Gluconeogenesis	2
nta00030	Pentose phosphate pathway	2
nta00051	Fructose and mannose metabolism	2
nta00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03015	mRNA surveillance pathway	3
tae00310	Lysine degradation	2
tae03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03018	RNA degradation	3
tae03015	mRNA surveillance pathway	2
tae00061	Fatty acid biosynthesis	2
tae00780	Biotin metabolism	2
tae01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03015	mRNA surveillance pathway	2
hvu04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04120	Ubiquitin mediated proteolysis	2

Expression

Expression pattern

Entrez Gene ID^*

107892264

107888663

822389

103875197

111213031

106349234

102623696

100775274

100245681

7490707

11418724

101252252

102601532

107761038

107807007

4325197

103649701

123077286

123068785

123060274

123442809

8078488

100837770

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 107892264 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107892264 (ghi-r.1 coexpression data)


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	2	1	1	2	1	1	1	1	1	1	1	2	1	1	3	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107892264 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107892264 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**