ATTED-II : GeneCoexpression result

Species	Gene	Description
ghi-r.1	107895287	uncharacterized LOC107895287
ghi-r.1	107953949	uncharacterized LOC107953949
ghi-r.1	107912880	uncharacterized LOC107912880
ghi-r.1	107899368	uncharacterized LOC107899368
ath-u.5	AT5G16550	voltage-dependent L-type calcium channel subunit
bra-r.6	103846322	uncharacterized LOC103846322
bra-r.6	103851050	uncharacterized LOC103851050
bna-r.1	111211947	uncharacterized LOC111211947
bna-r.1	BNACNNG54130D	uncharacterized BNACNNG54130D
gma-u.5	100306640	uncharacterized LOC100306640
gma-u.5	100799172	uncharacterized LOC100799172
gma-u.5	100798498	uncharacterized LOC100798498
vvi-u.5	100262496	uncharacterized LOC100262496
ppo-u.5	7487415	uncharacterized LOC7487415
mtr-u.5	11432091	uncharacterized LOC11432091
mtr-u.5	11429971	uncharacterized LOC11429971
sly-u.5	101246202	uncharacterized LOC101246202
sot-r.1	102582984	uncharacterized LOC102582984
nta-r.1	107831283	uncharacterized LOC107831283
nta-r.1	107763626	uncharacterized LOC107763626
osa-u.5	4345614	uncharacterized LOC4345614
zma-u.5	100275140	uncharacterized LOC100275140
zma-u.5	100277068	uncharacterized LOC100277068
tae-r.2	123080659	uncharacterized LOC123080659
tae-r.2	123072433	uncharacterized LOC123072433
tae-r.2	123063430	uncharacterized LOC123063430
hvu-r.1	123445469	uncharacterized LOC123445469
sbi-r.1	8075383	uncharacterized LOC8075383
bdi-r.1	100828906	uncharacterized LOC100828906

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_016676077.2 [sequence] [blastp]

Subcellular
localization
wolf

vacu 8, plas 1, E.R. 1, golg 1, golg_plas 1, E.R._plas 1

(predict for XP_016676077.2)

Subcellular
localization
TargetP

other 8

(predict for XP_016676077.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107895287	ghi-r.1 for 107953949	ghi-r.1 for 107912880	ghi-r.1 for 107899368	ath-u.5 for AT5G16550	bra-r.6 for 103846322	bra-r.6 for 103851050	bna-r.1 for 111211947	bna-r.1 for BNACNNG54130D	gma-u.5 for 100306640	gma-u.5 for 100799172	gma-u.5 for 100798498	vvi-u.5 for 100262496	ppo-u.5 for 7487415	mtr-u.5 for 11432091	mtr-u.5 for 11429971	sly-u.5 for 101246202	sot-r.1 for 102582984	nta-r.1 for 107831283	nta-r.1 for 107763626	osa-u.5 for 4345614	zma-u.5 for 100275140	zma-u.5 for 100277068	tae-r.2 for 123080659	tae-r.2 for 123072433	tae-r.2 for 123063430	hvu-r.1 for 123445469	sbi-r.1 for 8075383	bdi-r.1 for 100828906

Ortholog

Ortholog ID: 5834

Species

ghi

ath

bra

bna

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC107953949

uncharacterized LOC107912880

uncharacterized LOC107899368

voltage-dependent L-type calcium channel subunit

uncharacterized LOC103846322

uncharacterized LOC103851050

uncharacterized BNACNNG54130D

uncharacterized LOC106379108

uncharacterized LOC100306640

uncharacterized LOC100799172

uncharacterized LOC100798498

uncharacterized LOC100262496

uncharacterized LOC7487415

uncharacterized LOC11432091

uncharacterized LOC11429971

uncharacterized LOC101246202

uncharacterized LOC102582984

uncharacterized LOC107831283

uncharacterized LOC107763626

uncharacterized LOC4345614

uncharacterized LOC100275140

uncharacterized LOC100277068

uncharacterized LOC123080659

uncharacterized LOC123072433

uncharacterized LOC123063430

uncharacterized LOC123445469

uncharacterized LOC8075383

uncharacterized LOC100828906

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00511	Other glycan degradation	2
ghi00562	Inositol phosphate metabolism	2
ghi04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00561	Glycerolipid metabolism	2
ghi00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00511	Other glycan degradation	2
ghi00562	Inositol phosphate metabolism	2
ghi04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04130	SNARE interactions in vesicular transport	2
ath04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00520	Amino sugar and nucleotide sugar metabolism	3
bra03083	Polycomb repressive complex	2
bra04120	Ubiquitin mediated proteolysis	2
bra04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
bra00940	Phenylpropanoid biosynthesis	2
bra00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00010	Glycolysis / Gluconeogenesis	4
bna00562	Inositol phosphate metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00010	Glycolysis / Gluconeogenesis	4
bna00562	Inositol phosphate metabolism	4
bna00480	Glutathione metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00999	Biosynthesis of various plant secondary metabolites	3
gma00280	Valine, leucine and isoleucine degradation	2
gma00650	Butanoate metabolism	2
gma00900	Terpenoid backbone biosynthesis	2
gma00909	Sesquiterpenoid and triterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	5
gma00270	Cysteine and methionine metabolism	2
gma00920	Sulfur metabolism	2
gma04122	Sulfur relay system	2
gma03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00920	Sulfur metabolism	3
gma00280	Valine, leucine and isoleucine degradation	3
gma00270	Cysteine and methionine metabolism	2
gma03083	Polycomb repressive complex	2
gma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00900	Terpenoid backbone biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04141	Protein processing in endoplasmic reticulum	3
sot03083	Polycomb repressive complex	2
sot04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00350	Tyrosine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00350	Tyrosine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00561	Glycerolipid metabolism	3
tae00730	Thiamine metabolism	2
tae00740	Riboflavin metabolism	2
tae01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00061	Fatty acid biosynthesis	2
hvu01212	Fatty acid metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

107953949

107912880

107899368

831517

103846322

103851050

106372225

106379108

100306640

100799172

100798498

100262496

7487415

11432091

11429971

101246202

102582984

107831283

107763626

4345614

100275140

100277068

123080659

123072433

123063430

123445469

8075383

100828906

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 107895287 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107895287 (ghi-r.1 coexpression data)


Species	ghi	ath	bra	bna	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre	cit
Paralog	4	1	2	2	3	1	1	2	1	1	2	1	2	3	1	1	1	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107895287 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107895287 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**