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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107901382   pentatricopeptide repeat-containing protein At1g09900 
 ghi-r.1   107888951   pentatricopeptide repeat-containing protein At3g04760, chloroplastic 
 ghi-r.1   107894420   pentatricopeptide repeat-containing protein At1g09900 
 ghi-r.1   107947746   pentatricopeptide repeat-containing protein At3g04760, chloroplastic-like 
 vvi-u.5   100853063   pentatricopeptide repeat-containing protein At1g63330 
 osa-u.5   9271712   pentatricopeptide repeat-containing protein At3g04760, chloroplastic 

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Top 50 coexpressed genes to 107901382 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107901382 (ghi-r.1 coexpression data)

CoexMap"107901382"


ghiLOC107901382 | Entrez gene ID : 107901382    
Species ghi vvi osa sot sly cit ath bna ppo bdi sbi gma mtr bra tae hvu zma cre nta
Paralog 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016682859.1 [sequence] [blastp]
XP_016682860.1 [sequence] [blastp]
XP_016682861.1 [sequence] [blastp]
XP_016682862.1 [sequence] [blastp]
XP_040951118.1 [sequence] [blastp]
XP_040951119.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 5,  mito 3,  cyto_mito 1  (predict for XP_016682859.1)
chlo 6,  chlo_mito 5,  mito 3,  cyto_mito 1  (predict for XP_016682860.1)
cyto 6,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_016682861.1)
chlo 5,  cyto 2,  nucl 1,  cyto_plas 1  (predict for XP_016682862.1)
chlo 5,  cyto 2,  nucl 1,  cyto_plas 1  (predict for XP_040951118.1)
chlo 5,  cyto 2,  nucl 1,  cyto_plas 1  (predict for XP_040951119.1)
Subcellular
localization
TargetP
mito 6  (predict for XP_016682859.1)
mito 6  (predict for XP_016682860.1)
other 9  (predict for XP_016682861.1)
mito 4  (predict for XP_016682862.1)
mito 4  (predict for XP_040951118.1)
mito 4  (predict for XP_040951119.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107901382
ghi-r.1
for
107888951
ghi-r.1
for
107894420
ghi-r.1
for
107947746
vvi-u.5
for
100853063
osa-u.5
for
9271712


Ortholog ID: 17717
Species ghi ghi ghi vvi osa
Symbol LOC107888951 LOC121209732 LOC121230393 LOC100853063 LOC9271712
Function* pentatricopeptide repeat-containing protein At3g04760, chloroplastic pentatricopeptide repeat-containing protein At3g04760, chloroplastic-like pentatricopeptide repeat-containing protein At1g64580 pentatricopeptide repeat-containing protein At1g63330 pentatricopeptide repeat-containing protein At3g04760, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107888951 121209732 121230393 100853063 9271712
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