Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1  107902853  pentatricopeptide repeat-containing protein DOT4, chloroplastic 
 ghi-r.1  107907510  pentatricopeptide repeat-containing protein At1g11290, chloroplastic 
 cit-r.1  102627142  pentatricopeptide repeat-containing protein At2g13600-like 
 vvi-u.5  100246893  pentatricopeptide repeat-containing protein At2g13600 
 ppo-u.5  7485504  pentatricopeptide repeat-containing protein At2g13600 
 sly-u.5  101262128  pentatricopeptide repeat-containing protein At4g33170-like 
 sot-r.1  102585674  pentatricopeptide repeat-containing protein At4g33170-like 
 nta-r.1  107762113  pentatricopeptide repeat-containing protein At4g33170-like 
 nta-r.1  107793845  pentatricopeptide repeat-containing protein At4g33170-like 

close


Top 50 coexpressed genes to 107902853 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 107902853 (ghi-r.1 coexpression data)

CoexMap"107902853"


ghiLOC107902853 | Entrez gene ID : 107902853
Species ghi cit vvi ppo sly sot nta sbi osa gma mtr bra tae ath bna hvu zma cre bdi
Paralog 2 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016684455.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 2  (predict for XP_016684455.1)
Subcellular
localization
TargetP
chlo 4,  other 4  (predict for XP_016684455.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

ghi-r.1
for
107902853


ghi-r.1
for
107907510


cit-r.1
for
102627142


vvi-u.5
for
100246893


ppo-u.5
for
7485504


sly-u.5
for
101262128


sot-r.1
for
102585674


nta-r.1
for
107762113


nta-r.1
for
107793845



Ortholog ID: 15568
Species ghi ghi cit vvi ppo sly sot nta nta
Symbol LOC107902853 LOC107907510 LOC102627142 LOC100246893 LOC7485504 LOC101262128 LOC102585674 LOC107762113 LOC107793845
Function* pentatricopeptide repeat-containing protein DOT4, chloroplastic pentatricopeptide repeat-containing protein At1g11290, chloroplastic pentatricopeptide repeat-containing protein At2g13600-like pentatricopeptide repeat-containing protein At2g13600 pentatricopeptide repeat-containing protein At2g13600 pentatricopeptide repeat-containing protein At4g33170-like pentatricopeptide repeat-containing protein At4g33170-like pentatricopeptide repeat-containing protein At4g33170-like pentatricopeptide repeat-containing protein At4g33170-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 7
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107902853 107907510 102627142 100246893 7485504 101262128 102585674 107762113 107793845
The preparation time of this page was 0.1 [sec].