ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107907191	protein unc-13 homolog
ghi-r.1	107962735	protein unc-13 homolog
ghi-r.1	121229237	protein unc-13 homolog
ghi-r.1	107960798	protein unc-13 homolog
ath-u.5	AT2G20010	Gls protein (DUF810)
ath-u.5	AT2G25800	elongation factor Ts (DUF810)
bra-r.6	103828262	protein unc-13 homolog
bra-r.6	103864688	protein unc-13 homolog
bna-r.1	106448687	protein unc-13 homolog
bna-r.1	111198099	protein unc-13 homolog
bna-r.1	BNAC07G00030D	protein unc-13 homolog
cit-r.1	102615209	protein unc-13 homolog
cit-r.1	102607730	hypothetical protein
gma-u.5	102665609	uncharacterized LOC102665609
gma-u.5	100817080	protein unc-13 homolog
gma-u.5	100814675	protein unc-13 homolog
vvi-u.5	100267936	protein unc-13 homolog
vvi-u.5	100250865	protein unc-13 homolog
ppo-u.5	7476701	protein unc-13 homolog
ppo-u.5	7470741	protein unc-13 homolog
mtr-u.5	11446739	protein unc-13 homolog
mtr-u.5	11433559	protein unc-13 homolog
sly-u.5	101253812	protein unc-13 homolog
sly-u.5	101265640	protein unc-13 homolog
sot-r.1	102589810	uncharacterized LOC102589810
sot-r.1	102592170	uncharacterized LOC102592170
nta-r.1	107765185	protein unc-13 homolog
nta-r.1	107800426	protein unc-13 homolog
nta-r.1	107812798	protein unc-13 homolog
osa-u.5	4346805	protein unc-13 homolog
osa-u.5	4345474	protein unc-13 homolog
zma-u.5	100279395	uncharacterized LOC100279395
zma-u.5	103632616	Retinol dehydrogenase 13
tae-r.2	123111749	protein unc-13 homolog
tae-r.2	123103532	protein unc-13 homolog
tae-r.2	123121309	protein unc-13 homolog
hvu-r.1	123452684	protein unc-13 homolog
sbi-r.1	8055553	uncharacterized LOC8055553
bdi-r.1	100832870	uncharacterized LOC100832870
bdi-r.1	100828941	uncharacterized LOC100828941

Top 50 coexpressed genes to 107907191 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107907191 (ghi-r.1 coexpression data)

CoexMap"107907191"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_016689940.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 3, nucl 1, mito 1, E.R. 1, cysk_nucl 1, cyto 1, plas 1, vacu 1, cyto_mito 1, cyto_plas 1

(predict for XP_016689940.2)

Subcellular
localization
TargetP

mito 7, other 4

(predict for XP_016689940.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107907191	ghi-r.1 for 107962735	ghi-r.1 for 121229237	ghi-r.1 for 107960798	ath-u.5 for AT2G20010	ath-u.5 for AT2G25800	bra-r.6 for 103828262	bra-r.6 for 103864688	bna-r.1 for 106448687	bna-r.1 for 111198099	bna-r.1 for BNAC07G00030D	cit-r.1 for 102615209	cit-r.1 for 102607730	gma-u.5 for 102665609	gma-u.5 for 100817080	gma-u.5 for 100814675	vvi-u.5 for 100267936	vvi-u.5 for 100250865	ppo-u.5 for 7476701	ppo-u.5 for 7470741	mtr-u.5 for 11446739	mtr-u.5 for 11433559	sly-u.5 for 101253812	sly-u.5 for 101265640	sot-r.1 for 102589810	sot-r.1 for 102592170	nta-r.1 for 107765185	nta-r.1 for 107800426	nta-r.1 for 107812798	osa-u.5 for 4346805	osa-u.5 for 4345474	zma-u.5 for 100279395	zma-u.5 for 103632616	tae-r.2 for 123111749	tae-r.2 for 123103532	tae-r.2 for 123121309	hvu-r.1 for 123452684	sbi-r.1 for 8055553	bdi-r.1 for 100832870	bdi-r.1 for 100828941

Ortholog

Ortholog ID: 3652

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

protein unc-13 homolog

Gls protein (DUF810)

elongation factor Ts (DUF810)

protein unc-13 homolog

hypothetical protein

uncharacterized LOC102665609

protein unc-13 homolog

uncharacterized LOC102589810

uncharacterized LOC102592170

protein unc-13 homolog

uncharacterized LOC100279395

Retinol dehydrogenase 13

protein unc-13 homolog

uncharacterized LOC8055553

uncharacterized LOC100832870

uncharacterized LOC100828941

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03013	Nucleocytoplasmic transport	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04141	Protein processing in endoplasmic reticulum	4
bra02010	ABC transporters	2
bra04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04977	Vitamin digestion and absorption	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04141	Protein processing in endoplasmic reticulum	3
bna00270	Cysteine and methionine metabolism	2
bna04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04977	Vitamin digestion and absorption	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00531	Glycosaminoglycan degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	3
vvi04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04142	Lysosome	3
mtr04144	Endocytosis	3
mtr04141	Protein processing in endoplasmic reticulum	2
mtr05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04626	Plant-pathogen interaction	3
sly01240	Biosynthesis of cofactors	2
sly04075	Plant hormone signal transduction	2
sly00561	Glycerolipid metabolism	2
sly00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04142	Lysosome	3
sot04144	Endocytosis	3
sot05100	Bacterial invasion of epithelial cells	3
sot00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04016	MAPK signaling pathway - plant	2
nta04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04016	MAPK signaling pathway - plant	2
tae04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04141	Protein processing in endoplasmic reticulum	2

Expression

Expression pattern

Entrez Gene ID^*

107907191

107962735

121202978

816520

817122

103828262

103864688

106448687

111198099

106401026

102615209

102607730

102665609

100814675

100796233

100267936

100250865

7476701

7470741

11446739

11433559

101253812

101265640

102589810

102592170

107800426

107812798

107832698

4346805

4345474

100279395

103632616

123111749

123103532

123121309

123452684

8055553

100832870

100828941

The preparation time of this page was 0.2 [sec].


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	2	2	3	2	3	2	2	2	2	2	3	2	2	3	1	1	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107907191 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107907191 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**