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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107909161   protein RRNAD1 
 ghi-r.1   107928400   protein RRNAD1 
 ath-u.5   AT1G16650   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 bra-r.6   103872455   methyltransferase-like protein 25 
 bna-r.1   106365591   probable methyltransferase-like protein 25 
 bna-r.1   106346755   probable methyltransferase-like protein 25 
 cit-r.1   102625913   uncharacterized LOC102625913 
 gma-u.5   100815120   protein RRNAD1 
 vvi-u.5   100262853   uncharacterized LOC100262853 
 ppo-u.5   7462573   uncharacterized LOC7462573 
 mtr-u.5   11424717   protein RRNAD1 
 sly-u.5   101261046   uncharacterized LOC101261046 
 sot-r.1   102585032   methyltransferase-like protein 25 
 nta-r.1   107772045   uncharacterized LOC107772045 
 nta-r.1   107777989   uncharacterized LOC107777989 
 osa-u.5   4352762   uncharacterized LOC4352762 
 zma-u.5   100216669   S-adenosyl-L-methionine-dependent methyltransferase superfamily protein 
 tae-r.2   123119418   protein RRNAD1 
 tae-r.2   123110409   protein RRNAD1 
 tae-r.2   123102235   protein RRNAD1 
 hvu-r.1   123397772   protein RRNAD1 
 sbi-r.1   8070142   protein RRNAD1 
 bdi-r.1   100846767   protein RRNAD1 

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Top 50 coexpressed genes to 107909161 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107909161 (ghi-r.1 coexpression data)

CoexMap"107909161"


ghiLOC107909161 | Entrez gene ID : 107909161    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 2 1 1 1 1 1 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_016692094.2 [sequence] [blastp]
XP_016692095.2 [sequence] [blastp]
XP_016692096.2 [sequence] [blastp]
XP_016692097.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_016692094.2)
nucl 2,  cyto 1,  mito 1,  E.R. 1,  golg 1,  nucl_plas 1,  cyto_E.R. 1  (predict for XP_016692095.2)
nucl 5,  cyto 3,  cysk_nucl 3  (predict for XP_016692096.2)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_016692097.2)
Subcellular
localization
TargetP
other 8,  scret 4  (predict for XP_016692094.2)
other 8,  scret 4  (predict for XP_016692095.2)
other 8,  scret 4  (predict for XP_016692096.2)
other 8,  scret 4  (predict for XP_016692097.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107909161
ghi-r.1
for
107928400
ath-u.5
for
AT1G16650
bra-r.6
for
103872455
bna-r.1
for
106365591
bna-r.1
for
106346755
cit-r.1
for
102625913
gma-u.5
for
100815120
vvi-u.5
for
100262853
ppo-u.5
for
7462573
mtr-u.5
for
11424717
sly-u.5
for
101261046
sot-r.1
for
102585032
nta-r.1
for
107772045
nta-r.1
for
107777989
osa-u.5
for
4352762
zma-u.5
for
100216669
tae-r.2
for
123119418
tae-r.2
for
123110409
tae-r.2
for
123102235
hvu-r.1
for
123397772
sbi-r.1
for
8070142
bdi-r.1
for
100846767


Ortholog ID: 11468
Species ghi ghi ath bra bna bna cit gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC107909161 LOC107928400 AT1G16650 LOC103872455 LOC106365591 LOC106346755 LOC102625913 LOC100815120 LOC100262853 LOC7462573 LOC11424717 LOC101261046 LOC102585032 LOC107772045 LOC107777989 LOC4352762 LOC100216669 LOC123119418 LOC123110409 LOC123102235 LOC123397772 LOC8070142 LOC100846767
Function* protein RRNAD1 protein RRNAD1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein methyltransferase-like protein 25 probable methyltransferase-like protein 25 probable methyltransferase-like protein 25 uncharacterized LOC102625913 protein RRNAD1 uncharacterized LOC100262853 uncharacterized LOC7462573 protein RRNAD1 uncharacterized LOC101261046 methyltransferase-like protein 25 uncharacterized LOC107772045 uncharacterized LOC107777989 uncharacterized LOC4352762 S-adenosyl-L-methionine-dependent methyltransferase superfamily protein protein RRNAD1 protein RRNAD1 protein RRNAD1 protein RRNAD1 protein RRNAD1 protein RRNAD1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
ghi03420 Nucleotide excision repair 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
ghi03420 Nucleotide excision repair 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna04120 Ubiquitin mediated proteolysis 4
bna03082 ATP-dependent chromatin remodeling 2
bna03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 4
bna03410 Base excision repair 4
bna03420 Nucleotide excision repair 4
bna03430 Mismatch repair 4
bna03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
gma04382 Cornified envelope formation 2
gma00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 3
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
sot03082 ATP-dependent chromatin remodeling 2
sot03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107909161 107928400 838234 103872455 106365591 106346755 102625913 100815120 100262853 7462573 11424717 101261046 102585032 107772045 107777989 4352762 100216669 123119418 123110409 123102235 123397772 8070142 100846767
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