ATTED-II : GeneCoexpression result

Species	Gene	Description
ghi-r.1	107911038	uncharacterized LOC107911038
ghi-r.1	107922817	uncharacterized LOC107922817
ghi-r.1	107907114	uncharacterized LOC107907114
ghi-r.1	107919316	uncharacterized LOC107919316
ath-u.5	AT2G47010	calcium/calcium/calmodulin-dependent Serine/Threonine-kinase
ath-u.5	AT1G17030	uncharacterized protein
bra-r.6	103866411	uncharacterized LOC103866411
bra-r.6	103872489	uncharacterized LOC103872489
bna-r.1	106450456	uncharacterized LOC106450456
bna-r.1	106346732	uncharacterized LOC106346732
bna-r.1	106363898	uncharacterized LOC106363898
cit-r.1	102626856	uncharacterized LOC102626856
cit-r.1	102624078	hypothetical protein
gma-u.5	100803952	uncharacterized LOC100803952
gma-u.5	100803234	uncharacterized LOC100803234
gma-u.5	100799914	uncharacterized LOC100799914
vvi-u.5	100255480	uncharacterized LOC100255480
ppo-u.5	7460497	uncharacterized LOC7460497
ppo-u.5	7476315	uncharacterized LOC7476315
mtr-u.5	11426606	uncharacterized LOC11426606
sly-u.5	104645868	uncharacterized LOC104645868
sly-u.5	104645869	uncharacterized LOC104645869
sly-u.5	101247696	uncharacterized LOC101247696
sot-r.1	102587599	uncharacterized LOC102587599
nta-r.1	107800030	uncharacterized LOC107800030
nta-r.1	107791135	uncharacterized LOC107791135
osa-u.5	4338265	uncharacterized LOC4338265
osa-u.5	4338267	uncharacterized LOC4338267
zma-u.5	100273171	Retrovirus-related Pol polyprotein from transposon TNT 1-94
tae-r.2	123098198	uncharacterized LOC123098198
tae-r.2	123085129	uncharacterized LOC123085129
tae-r.2	123092922	uncharacterized LOC123092922
hvu-r.1	123446767	uncharacterized LOC123446767
sbi-r.1	110431261	uncharacterized LOC110431261
bdi-r.1	100838619	uncharacterized LOC100838619

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_016694425.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 2, extr 2, E.R. 2, nucl 1, cyto 1, cyto_nucl 1

(predict for XP_016694425.1)

Subcellular
localization
TargetP

scret 4

(predict for XP_016694425.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107911038	ghi-r.1 for 107922817	ghi-r.1 for 107907114	ghi-r.1 for 107919316	ath-u.5 for AT2G47010	ath-u.5 for AT1G17030	bra-r.6 for 103866411	bra-r.6 for 103872489	bna-r.1 for 106450456	bna-r.1 for 106346732	bna-r.1 for 106363898	cit-r.1 for 102626856	cit-r.1 for 102624078	gma-u.5 for 100803952	gma-u.5 for 100803234	gma-u.5 for 100799914	vvi-u.5 for 100255480	ppo-u.5 for 7460497	ppo-u.5 for 7476315	mtr-u.5 for 11426606	sly-u.5 for 104645868	sly-u.5 for 104645869	sly-u.5 for 101247696	sot-r.1 for 102587599	nta-r.1 for 107800030	nta-r.1 for 107791135	osa-u.5 for 4338265	osa-u.5 for 4338267	zma-u.5 for 100273171	tae-r.2 for 123098198	tae-r.2 for 123085129	tae-r.2 for 123092922	hvu-r.1 for 123446767	sbi-r.1 for 110431261	bdi-r.1 for 100838619

Ortholog

Ortholog ID: 3216

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC107911038

uncharacterized LOC107922817

uncharacterized LOC107907114

calcium/calcium/calmodulin-dependent Serine/Threonine-kinase

uncharacterized protein

uncharacterized LOC103866411

uncharacterized LOC103872489

uncharacterized LOC106450456

uncharacterized LOC106346732

uncharacterized LOC106394625

uncharacterized LOC102626856

hypothetical protein

uncharacterized LOC100803952

uncharacterized LOC100803234

uncharacterized LOC100799914

uncharacterized LOC100255480

uncharacterized LOC7476315

uncharacterized LOC11426606

uncharacterized LOC104645868

uncharacterized LOC101247696

uncharacterized LOC101260262

uncharacterized LOC102583650

uncharacterized LOC107791135

uncharacterized LOC107763521

uncharacterized LOC4338265

uncharacterized LOC4338267

Retrovirus-related Pol polyprotein from transposon TNT 1-94

uncharacterized LOC123098198

uncharacterized LOC123085129

uncharacterized LOC123092922

uncharacterized LOC123446767

uncharacterized LOC110431261

uncharacterized LOC100838619

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00020	Citrate cycle (TCA cycle)	2
bra01200	Carbon metabolism	2
bra01210	2-Oxocarboxylic acid metabolism	2
bra01230	Biosynthesis of amino acids	2
bra04081	Hormone signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00061	Fatty acid biosynthesis	5
bna00280	Valine, leucine and isoleucine degradation	5
bna01212	Fatty acid metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00520	Amino sugar and nucleotide sugar metabolism	4
bna04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00061	Fatty acid biosynthesis	3
bna00280	Valine, leucine and isoleucine degradation	3
bna01212	Fatty acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00480	Glutathione metabolism	2
cit02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00511	Other glycan degradation	2
gma04142	Lysosome	2
gma00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma01250	Biosynthesis of nucleotide sugars	4
gma00520	Amino sugar and nucleotide sugar metabolism	3
gma00541	Biosynthesis of various nucleotide sugars	3
gma00040	Pentose and glucuronate interconversions	2
gma00053	Ascorbate and aldarate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00520	Amino sugar and nucleotide sugar metabolism	3
gma01250	Biosynthesis of nucleotide sugars	3
gma00040	Pentose and glucuronate interconversions	2
gma00053	Ascorbate and aldarate metabolism	2
gma00541	Biosynthesis of various nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00520	Amino sugar and nucleotide sugar metabolism	2
ppo01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03030	DNA replication	5
sly01232	Nucleotide metabolism	3
sly03420	Nucleotide excision repair	3
sly03430	Mismatch repair	3
sly00240	Pyrimidine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00460	Cyanoamino acid metabolism	2
osa00500	Starch and sucrose metabolism	2
osa00999	Biosynthesis of various plant secondary metabolites	2
osa00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04145	Phagosome	2
hvu04517	IgSF CAM signaling	2
hvu04814	Motor proteins	2

Expression

Expression pattern

Entrez Gene ID^*

107911038

107922817

107907114

819315

838273

103866411

103872489

106450456

106346732

106394625

102626856

102624078

100803952

100803234

100799914

100255480

7476315

11426606

104645868

101247696

101260262

102583650

107791135

107763521

4338265

4338267

100273171

123098198

123085129

123092922

123446767

110431261

100838619

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 107911038 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107911038 (ghi-r.1 coexpression data)


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	2	2	3	2	3	1	2	1	3	1	2	2	1	3	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107911038 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107911038 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**