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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107920107   U11/U12 small nuclear ribonucleoprotein 48 kDa protein 
 ghi-r.1   107893825   U11/U12 small nuclear ribonucleoprotein 48 kDa protein 
 ath-u.5   AT3G04160   U11/U12 small nuclear ribonucleoprotein 
 bra-r.6   103859024   U11/U12 small nuclear ribonucleoprotein 48 kDa protein 
 bna-r.1   106447622   U11/U12 small nuclear ribonucleoprotein 48 kDa protein 
 bna-r.1   106438972   U11/U12 small nuclear ribonucleoprotein 48 kDa protein-like 
 cit-r.1   102620724   U11/U12 small nuclear ribonucleoprotein 48 kDa protein 
 gma-u.5   100803944   U11/U12 small nuclear ribonucleoprotein 48 kDa protein 
 vvi-u.5   100263926   U11/U12 small nuclear ribonucleoprotein 48 kDa protein 
 ppo-u.5   18108217   U11/U12 small nuclear ribonucleoprotein 48 kDa protein 
 mtr-u.5   11425077   U11/U12 small nuclear ribonucleoprotein 48 kDa protein 
 sly-u.5   101244071   U11/U12 small nuclear ribonucleoprotein 48 kDa protein 
 sot-r.1   102582686   U11/U12 small nuclear ribonucleoprotein 48 kDa protein 
 nta-r.1   107782741   U11/U12 small nuclear ribonucleoprotein 48 kDa protein 
 nta-r.1   107811857   U11/U12 small nuclear ribonucleoprotein 48 kDa protein 
 osa-u.5   4335546   U11/U12 small nuclear ribonucleoprotein 48 kDa protein 
 zma-u.5   100279189   U11/U12 small nuclear ribonucleoprotein 48 kDa protein 
 tae-r.2   123053084   U11/U12 small nuclear ribonucleoprotein 48 kDa protein 
 tae-r.2   123188993   U11/U12 small nuclear ribonucleoprotein 48 kDa protein 
 tae-r.2   123045251   U11/U12 small nuclear ribonucleoprotein 48 kDa protein 
 hvu-r.1   123426469   U11/U12 small nuclear ribonucleoprotein 48 kDa protein 
 sbi-r.1   8057050   U11/U12 small nuclear ribonucleoprotein 48 kDa protein 
 bdi-r.1   100844940   U11/U12 small nuclear ribonucleoprotein 48 kDa protein 

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Top 50 coexpressed genes to 107920107 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107920107 (ghi-r.1 coexpression data)

CoexMap"107920107"


ghiLOC107920107 | Entrez gene ID : 107920107    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 2 1 1 1 1 1 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_016705121.1 [sequence] [blastp]
XP_016705122.1 [sequence] [blastp]
XP_016705123.1 [sequence] [blastp]
XP_016705124.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 4,  mito 1,  pero 1  (predict for XP_016705121.1)
chlo 5,  nucl 4,  mito 1,  pero 1  (predict for XP_016705122.1)
chlo 5,  nucl 4,  mito 1,  pero 1  (predict for XP_016705123.1)
chlo 5,  nucl 4,  mito 1,  pero 1  (predict for XP_016705124.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_016705121.1)
chlo 9  (predict for XP_016705122.1)
chlo 9  (predict for XP_016705123.1)
chlo 9  (predict for XP_016705124.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107920107
ghi-r.1
for
107893825
ath-u.5
for
AT3G04160
bra-r.6
for
103859024
bna-r.1
for
106447622
bna-r.1
for
106438972
cit-r.1
for
102620724
gma-u.5
for
100803944
vvi-u.5
for
100263926
ppo-u.5
for
18108217
mtr-u.5
for
11425077
sly-u.5
for
101244071
sot-r.1
for
102582686
nta-r.1
for
107782741
nta-r.1
for
107811857
osa-u.5
for
4335546
zma-u.5
for
100279189
tae-r.2
for
123053084
tae-r.2
for
123188993
tae-r.2
for
123045251
hvu-r.1
for
123426469
sbi-r.1
for
8057050
bdi-r.1
for
100844940


Ortholog ID: 10728
Species ghi ghi ath bra bna bna cit gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC107920107 LOC107893825 AT3G04160 LOC103859024 LOC106447622 LOC106438972 LOC102620724 LOC100803944 LOC100263926 LOC18108217 LOC11425077 LOC101244071 LOC102582686 LOC107782741 LOC107811857 LOC4335546 LOC100279189 LOC123053084 LOC123188993 LOC123045251 LOC123426469 LOC8057050 LOC100844940
Function* U11/U12 small nuclear ribonucleoprotein 48 kDa protein U11/U12 small nuclear ribonucleoprotein 48 kDa protein U11/U12 small nuclear ribonucleoprotein U11/U12 small nuclear ribonucleoprotein 48 kDa protein U11/U12 small nuclear ribonucleoprotein 48 kDa protein U11/U12 small nuclear ribonucleoprotein 48 kDa protein-like U11/U12 small nuclear ribonucleoprotein 48 kDa protein U11/U12 small nuclear ribonucleoprotein 48 kDa protein U11/U12 small nuclear ribonucleoprotein 48 kDa protein U11/U12 small nuclear ribonucleoprotein 48 kDa protein U11/U12 small nuclear ribonucleoprotein 48 kDa protein U11/U12 small nuclear ribonucleoprotein 48 kDa protein U11/U12 small nuclear ribonucleoprotein 48 kDa protein U11/U12 small nuclear ribonucleoprotein 48 kDa protein U11/U12 small nuclear ribonucleoprotein 48 kDa protein U11/U12 small nuclear ribonucleoprotein 48 kDa protein U11/U12 small nuclear ribonucleoprotein 48 kDa protein U11/U12 small nuclear ribonucleoprotein 48 kDa protein U11/U12 small nuclear ribonucleoprotein 48 kDa protein U11/U12 small nuclear ribonucleoprotein 48 kDa protein U11/U12 small nuclear ribonucleoprotein 48 kDa protein U11/U12 small nuclear ribonucleoprotein 48 kDa protein U11/U12 small nuclear ribonucleoprotein 48 kDa protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma03015 mRNA surveillance pathway 4
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107920107 107893825 819571 103859024 106447622 106438972 102620724 100803944 100263926 18108217 11425077 101244071 102582686 107782741 107811857 4335546 100279189 123053084 123188993 123045251 123426469 8057050 100844940
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