ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107930170	uncharacterized LOC107930170
ghi-r.1	107947038	uncharacterized LOC107947038
ghi-r.1	107947312	uncharacterized LOC107947312
ghi-r.1	107963794	uncharacterized LOC107963794
ath-u.5	AT4G25620	hydroxyproline-rich glycoprotein family protein
ath-u.5	AT5G52430	hydroxyproline-rich glycoprotein family protein
ath-u.5	AT1G63720	hydroxyproline-rich glycoprotein family protein
bra-r.6	103832477	uncharacterized LOC103832477
bra-r.6	103838254	uncharacterized protein At1g76660
bra-r.6	103861578	uncharacterized LOC103861578
bna-r.1	106450652	uncharacterized protein At1g76660
bna-r.1	106442961	uncharacterized LOC106442961
bna-r.1	106440855	uncharacterized LOC106440855
cit-r.1	102626793	uncharacterized LOC102626793
cit-r.1	102622119	uncharacterized LOC102622119
gma-u.5	100798631	uncharacterized LOC100798631
gma-u.5	100791666	uncharacterized LOC100791666
gma-u.5	100787393	uncharacterized LOC100787393
vvi-u.5	100264629	uncharacterized LOC100264629
vvi-u.5	100241023	uncharacterized LOC100241023
ppo-u.5	7484370	uncharacterized LOC7484370
ppo-u.5	7458183	uncharacterized LOC7458183
ppo-u.5	7472759	uncharacterized LOC7472759
mtr-u.5	25496369	uncharacterized LOC25496369
mtr-u.5	25502061	uncharacterized LOC25502061
sly-u.5	101254118	uncharacterized LOC101254118
sly-u.5	101260903	uncharacterized LOC101260903
sot-r.1	102583548	uncharacterized LOC102583548
sot-r.1	102593971	uncharacterized protein At1g76660
nta-r.1	107821466	uncharacterized LOC107821466
nta-r.1	107782211	uncharacterized protein At1g76660-like
nta-r.1	107796222	uncharacterized LOC107796222
osa-u.5	4331183	uncharacterized LOC4331183
zma-u.5	100275621	hydroxyproline-rich glycoprotein family protein
tae-r.2	123129066	endochitinase A
tae-r.2	123146237	uncharacterized LOC123146237
tae-r.2	123139947	uncharacterized LOC123139947
hvu-r.1	123402923	uncharacterized LOC123402923
sbi-r.1	8059698	sine oculis-binding protein homolog
bdi-r.1	100840826	uncharacterized LOC100840826

Top 50 coexpressed genes to 107930170 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107930170 (ghi-r.1 coexpression data)

CoexMap"107930170"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_016717240.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 5, vacu 3, chlo_mito 3

(predict for XP_016717240.1)

Subcellular
localization
TargetP

other 5

(predict for XP_016717240.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107930170	ghi-r.1 for 107947038	ghi-r.1 for 107947312	ghi-r.1 for 107963794	ath-u.5 for AT4G25620	ath-u.5 for AT5G52430	ath-u.5 for AT1G63720	bra-r.6 for 103832477	bra-r.6 for 103838254	bra-r.6 for 103861578	bna-r.1 for 106450652	bna-r.1 for 106442961	bna-r.1 for 106440855	cit-r.1 for 102626793	cit-r.1 for 102622119	gma-u.5 for 100798631	gma-u.5 for 100791666	gma-u.5 for 100787393	vvi-u.5 for 100264629	vvi-u.5 for 100241023	ppo-u.5 for 7484370	ppo-u.5 for 7458183	ppo-u.5 for 7472759	mtr-u.5 for 25496369	mtr-u.5 for 25502061	sly-u.5 for 101254118	sly-u.5 for 101260903	sot-r.1 for 102583548	sot-r.1 for 102593971	nta-r.1 for 107821466	nta-r.1 for 107782211	nta-r.1 for 107796222	osa-u.5 for 4331183	zma-u.5 for 100275621	tae-r.2 for 123129066	tae-r.2 for 123146237	tae-r.2 for 123139947	hvu-r.1 for 123402923	sbi-r.1 for 8059698	bdi-r.1 for 100840826

Ortholog

Ortholog ID: 2923

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC107947038

uncharacterized LOC107947312

uncharacterized LOC107931939

hydroxyproline-rich glycoprotein family protein

uncharacterized protein At1g76660

uncharacterized LOC103861578

uncharacterized LOC103863361

uncharacterized LOC106347099

uncharacterized LOC106392079

uncharacterized LOC106406548

uncharacterized LOC102626793

uncharacterized LOC102622119

uncharacterized LOC100791666

uncharacterized LOC100814955

uncharacterized LOC100818313

uncharacterized LOC100264629

uncharacterized LOC100241023

uncharacterized LOC7484370

uncharacterized LOC7458183

uncharacterized LOC7472759

uncharacterized LOC25496369

uncharacterized LOC25502061

uncharacterized LOC101254118

uncharacterized LOC101260903

uncharacterized LOC102583548

uncharacterized protein At1g76660

uncharacterized LOC107821466

uncharacterized protein At1g76660-like

uncharacterized protein At1g76660

uncharacterized LOC4331183

hydroxyproline-rich glycoprotein family protein

endochitinase A

uncharacterized LOC123146237

uncharacterized LOC123139947

uncharacterized LOC123402923

sine oculis-binding protein homolog

uncharacterized LOC100840826

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04016	MAPK signaling pathway - plant	4
ghi04626	Plant-pathogen interaction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04016	MAPK signaling pathway - plant	4
ghi04626	Plant-pathogen interaction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04626	Plant-pathogen interaction	3
bra04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	3
bra00561	Glycerolipid metabolism	2
bra00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00052	Galactose metabolism	2
cit00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04016	MAPK signaling pathway - plant	3
gma04626	Plant-pathogen interaction	3
gma00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04712	Circadian rhythm - plant	3
ppo04016	MAPK signaling pathway - plant	3
ppo04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00920	Sulfur metabolism	2
ppo01320	Sulfur cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	2
sly04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	4
sot04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00073	Cutin, suberine and wax biosynthesis	2
nta04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04120	Ubiquitin mediated proteolysis	2

Expression

Expression pattern

Entrez Gene ID^*

107947038

107947312

107931939

828667

835319

842676

103838254

103861578

103863361

106347099

106392079

106406548

102626793

102622119

100791666

100814955

100818313

100264629

100241023

7484370

7458183

7472759

25496369

25502061

101254118

101260903

102583548

102593971

107821466

107782211

107814830

4331183

100275621

123129066

123146237

123139947

123402923

8059698

100840826

The preparation time of this page was 0.2 [sec].


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	3	3	2	3	2	3	2	2	2	3	1	1	3	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107930170 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107930170 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**