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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107939655   ISWI chromatin-remodeling complex ATPase CHR11 
 ghi-r.1   107931464   ISWI chromatin-remodeling complex ATPase CHR11 
 ghi-r.1   107935146   ISWI chromatin-remodeling complex ATPase CHR11 
 ghi-r.1   107929074   chromatin structure-remodeling complex protein SYD 
 ath-u.5   SYD   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-u.5   CHR11   chromatin-remodeling protein 11 
 ath-u.5   CHR17   chromatin remodeling factor17 
 bra-r.6   103857840   chromatin structure-remodeling complex protein SYD 
 bra-r.6   103854480   ISWI chromatin-remodeling complex ATPase CHR11 
 bra-r.6   103849978   ISWI chromatin-remodeling complex ATPase CHR11 
 bna-r.1   106438109   chromatin structure-remodeling complex protein SYD-like 
 bna-r.1   106431435   ISWI chromatin-remodeling complex ATPase CHR17 
 bna-r.1   125606850   chromatin structure-remodeling complex protein SYD-like 
 cit-r.1   102630394   ISWI chromatin-remodeling complex ATPase CHR11 
 cit-r.1   102616926   chromatin structure-remodeling complex protein SYD 
 gma-u.5   100809750   ISWI chromatin-remodeling complex ATPase CHR11 
 gma-u.5   100782649   ISWI chromatin-remodeling complex ATPase CHR11 
 gma-u.5   100790172   chromatin structure-remodeling complex protein SYD 
 vvi-u.5   100244281   ISWI chromatin-remodeling complex ATPase CHR11 
 vvi-u.5   100254600   chromatin structure-remodeling complex protein SYD 
 ppo-u.5   7475387   chromatin structure-remodeling complex protein SYD 
 ppo-u.5   18109257   ISWI chromatin-remodeling complex ATPase CHR11 
 ppo-u.5   18101704   chromatin structure-remodeling complex protein SYD 
 mtr-u.5   25494064   ISWI chromatin-remodeling complex ATPase CHR17 
 mtr-u.5   11441860   ISWI chromatin-remodeling complex ATPase CHR11 
 mtr-u.5   11418353   chromatin structure-remodeling complex protein SYD 
 sly-u.5   101247785   chromatin structure-remodeling complex protein SYD 
 sly-u.5   101267413   ISWI chromatin-remodeling complex ATPase CHR11-like 
 sly-u.5   101245879   ISWI chromatin-remodeling complex ATPase CHR11 
 sot-r.1   102584530   chromatin structure-remodeling complex protein SYD 
 sot-r.1   102599561   putative chromatin-remodeling complex ATPase chain 
 sot-r.1   102580212   putative chromatin-remodeling complex ATPase chain 
 nta-r.1   107818563   uncharacterized LOC107818563 
 nta-r.1   107802947   ISWI chromatin-remodeling complex ATPase CHR11 
 nta-r.1   107792820   ISWI chromatin-remodeling complex ATPase CHR11-like 
 osa-u.5   4337825   probable chromatin-remodeling complex ATPase chain 
 osa-u.5   9267065   chromatin structure-remodeling complex protein SYD 
 osa-u.5   4325731   probable chromatin-remodeling complex ATPase chain 
 zma-u.5   100383943   uncharacterized LOC100383943 
 zma-u.5   103650180   probable chromatin-remodeling complex ATPase chain 
 zma-u.5   103635205   probable chromatin-remodeling complex ATPase chain 
 tae-r.2   123077117   probable chromatin-remodeling complex ATPase chain 
 tae-r.2   123068594   probable chromatin-remodeling complex ATPase chain 
 tae-r.2   123060112   probable chromatin-remodeling complex ATPase chain 
 hvu-r.1   123442674   probable chromatin-remodeling complex ATPase chain 
 hvu-r.1   123413476   chromatin structure-remodeling complex protein SYD-like 
 hvu-r.1   123425436   probable chromatin-remodeling complex ATPase chain 
 sbi-r.1   8061515   chromatin structure-remodeling complex protein SYD 
 sbi-r.1   8075365   probable chromatin-remodeling complex ATPase chain 
 bdi-r.1   100845251   chromatin structure-remodeling complex protein SYD 
 bdi-r.1   100836141   probable chromatin-remodeling complex ATPase chain 
 bdi-r.1   100822641   probable chromatin-remodeling complex ATPase chain 
 cre-r.1   CHLRE_12g508150v5   uncharacterized protein 
 cre-r.1   CHLRE_09g390000v5   uncharacterized protein 
 cre-r.1   CHLRE_03g158550v5   uncharacterized protein 

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Top 50 coexpressed genes to 107939655 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107939655 (ghi-r.1 coexpression data)

CoexMap"107939655"


ghiLOC107939655 | Entrez gene ID : 107939655    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 3 3 2 3 2 3 3 3 3 3 3 3 3 3 2 3 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03082 [list] [network] ATP-dependent chromatin remodeling (185 genes)
GO BP
GO:0034728 [list] [network] nucleosome organization  (113 genes)  IEA  
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (1121 genes)  IEA  
GO CC
GO:0000785 [list] [network] chromatin  (561 genes)  IEA  
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0031491 [list] [network] nucleosome binding  (81 genes)  IEA  
GO:0140658 [list] [network] ATP-dependent chromatin remodeler activity  (93 genes)  IEA  
GO:0042393 [list] [network] histone binding  (158 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (974 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (4831 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (5155 genes)  IEA  
Protein XP_016728504.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 8,  nucl 1  (predict for XP_016728504.1)
Subcellular
localization
TargetP
other 7,  chlo 4  (predict for XP_016728504.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107939655
ghi-r.1
for
107931464
ghi-r.1
for
107935146
ghi-r.1
for
107929074
ath-u.5
for
SYD
ath-u.5
for
CHR11
ath-u.5
for
CHR17
bra-r.6
for
103857840
bra-r.6
for
103854480
bra-r.6
for
103849978
bna-r.1
for
106438109
bna-r.1
for
106431435
bna-r.1
for
125606850
cit-r.1
for
102630394
cit-r.1
for
102616926
gma-u.5
for
100809750
gma-u.5
for
100782649
gma-u.5
for
100790172
vvi-u.5
for
100244281
vvi-u.5
for
100254600
ppo-u.5
for
7475387
ppo-u.5
for
18109257
ppo-u.5
for
18101704
mtr-u.5
for
25494064
mtr-u.5
for
11441860
mtr-u.5
for
11418353
sly-u.5
for
101247785
sly-u.5
for
101267413
sly-u.5
for
101245879
sot-r.1
for
102584530
sot-r.1
for
102599561
sot-r.1
for
102580212
nta-r.1
for
107818563
nta-r.1
for
107802947
nta-r.1
for
107792820
osa-u.5
for
4337825
osa-u.5
for
9267065
osa-u.5
for
4325731
zma-u.5
for
100383943
zma-u.5
for
103650180
zma-u.5
for
103635205
tae-r.2
for
123077117
tae-r.2
for
123068594
tae-r.2
for
123060112
hvu-r.1
for
123442674
hvu-r.1
for
123413476
hvu-r.1
for
123425436
sbi-r.1
for
8061515
sbi-r.1
for
8075365
bdi-r.1
for
100845251
bdi-r.1
for
100836141
bdi-r.1
for
100822641
cre-r.1
for
CHLRE_12g508150v5
cre-r.1
for
CHLRE_09g390000v5
cre-r.1
for
CHLRE_03g158550v5


Ortholog ID: 1374
Species ghi ghi ghi ath ath ath bra bra bra bna bna bna cit cit gma gma gma vvi vvi ppo ppo ppo mtr mtr mtr sly sly sly sot sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi bdi bdi bdi cre cre cre
Symbol LOC107939655 LOC107931464 LOC121214480 SYD CHR11 CHR17 LOC103857840 LOC103854480 LOC103845818 LOC106371924 LOC106387801 LOC106418220 LOC102630394 LOC102616926 LOC100809750 LOC100782649 LOC100814442 LOC100244281 LOC100254600 LOC7475387 LOC18109257 LOC7454263 LOC25494064 LOC11441860 LOC11418353 LOC101247785 LOC101267413 LOC101245879 LOC102584530 LOC102599561 LOC102580212 LOC107818563 LOC107777060 LOC107762995 LOC4337825 LOC9267065 LOC4325731 LOC100383943 LOC103650180 LOC103635205 LOC123068594 LOC123060112 LOC123170870 LOC123442674 LOC123413476 LOC123425436 LOC8061515 LOC8075365 LOC100845251 LOC100836141 LOC100822641 CHLRE_12g508150v5 CHLRE_09g390000v5 CHLRE_03g162701v5
Function* ISWI chromatin-remodeling complex ATPase CHR11 ISWI chromatin-remodeling complex ATPase CHR11 ISWI chromatin-remodeling complex ATPase CHR11 P-loop containing nucleoside triphosphate hydrolases superfamily protein chromatin-remodeling protein 11 chromatin remodeling factor17 chromatin structure-remodeling complex protein SYD ISWI chromatin-remodeling complex ATPase CHR11 ISWI chromatin-remodeling complex ATPase CHR17 ISWI chromatin-remodeling complex ATPase CHR17 ISWI chromatin-remodeling complex ATPase CHR17 ISWI chromatin-remodeling complex ATPase CHR11-like ISWI chromatin-remodeling complex ATPase CHR11 chromatin structure-remodeling complex protein SYD ISWI chromatin-remodeling complex ATPase CHR11 ISWI chromatin-remodeling complex ATPase CHR11 ISWI chromatin-remodeling complex ATPase CHR11 ISWI chromatin-remodeling complex ATPase CHR11 chromatin structure-remodeling complex protein SYD chromatin structure-remodeling complex protein SYD ISWI chromatin-remodeling complex ATPase CHR11 ISWI chromatin-remodeling complex ATPase CHR11 ISWI chromatin-remodeling complex ATPase CHR17 ISWI chromatin-remodeling complex ATPase CHR11 chromatin structure-remodeling complex protein SYD chromatin structure-remodeling complex protein SYD ISWI chromatin-remodeling complex ATPase CHR11-like ISWI chromatin-remodeling complex ATPase CHR11 chromatin structure-remodeling complex protein SYD putative chromatin-remodeling complex ATPase chain putative chromatin-remodeling complex ATPase chain uncharacterized LOC107818563 uncharacterized LOC107777060 putative chromatin-remodeling complex ATPase chain probable chromatin-remodeling complex ATPase chain chromatin structure-remodeling complex protein SYD probable chromatin-remodeling complex ATPase chain uncharacterized LOC100383943 probable chromatin-remodeling complex ATPase chain probable chromatin-remodeling complex ATPase chain probable chromatin-remodeling complex ATPase chain probable chromatin-remodeling complex ATPase chain uncharacterized LOC123170870 probable chromatin-remodeling complex ATPase chain chromatin structure-remodeling complex protein SYD-like probable chromatin-remodeling complex ATPase chain chromatin structure-remodeling complex protein SYD probable chromatin-remodeling complex ATPase chain chromatin structure-remodeling complex protein SYD probable chromatin-remodeling complex ATPase chain probable chromatin-remodeling complex ATPase chain uncharacterized protein uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 6
ghi04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03082 ATP-dependent chromatin remodeling 2
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
ath03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 3
bra03082 ATP-dependent chromatin remodeling 2
bra00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 7
bra03013 Nucleocytoplasmic transport 3
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 3
cit04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma03082 ATP-dependent chromatin remodeling 3
gma03250 Viral life cycle - HIV-1 2
gma00270 Cysteine and methionine metabolism 2
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 4
gma03082 ATP-dependent chromatin remodeling 3
gma00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 4
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 4
ppo03083 Polycomb repressive complex 2
ppo03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 4
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
mtr03082 ATP-dependent chromatin remodeling 2
mtr03083 Polycomb repressive complex 2
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 4
mtr03013 Nucleocytoplasmic transport 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 3
sly04120 Ubiquitin mediated proteolysis 2
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot03013 Nucleocytoplasmic transport 3
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta03082 ATP-dependent chromatin remodeling 2
nta03022 Basal transcription factors 2
nta04120 Ubiquitin mediated proteolysis 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 4
nta03082 ATP-dependent chromatin remodeling 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta03082 ATP-dependent chromatin remodeling 4
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00270 Cysteine and methionine metabolism 2
zma03082 ATP-dependent chromatin remodeling 2
zma03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
zma03082 ATP-dependent chromatin remodeling 2
zma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03430 Mismatch repair 3
tae03082 ATP-dependent chromatin remodeling 3
tae00230 Purine metabolism 3
tae00240 Pyrimidine metabolism 3
tae00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
tae00230 Purine metabolism 2
tae00240 Pyrimidine metabolism 2
tae00480 Glutathione metabolism 2
tae01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 2
tae04518 Integrin signaling 2
tae03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 3
hvu04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
bdi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107939655 107931464 121214480 817375 819814 831980 103857840 103854480 103845818 106371924 106387801 106418220 102630394 102616926 100809750 100782649 100814442 100244281 100254600 7475387 18109257 7454263 25494064 11441860 11418353 101247785 101267413 101245879 102584530 102599561 102580212 107818563 107777060 107762995 4337825 9267065 4325731 100383943 103650180 103635205 123068594 123060112 123170870 123442674 123413476 123425436 8061515 8075365 100845251 100836141 100822641 5716515 5720064 5729082
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