ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107942830	transformer-2 protein homolog alpha
ghi-r.1	107927659	organelle RRM domain-containing protein 2, mitochondrial
ath-u.5	AT5G19030	RNA-binding (RRM/RBD/RNP motifs) family protein
bra-r.6	103856361	organelle RRM domain-containing protein 1, chloroplastic
cit-r.1	102626739	organelle RRM domain-containing protein 2, mitochondrial
gma-u.5	100791917	RNA recognition motif-containing protein
vvi-u.5	100254593	glycine-rich RNA-binding protein 3, mitochondrial
mtr-u.5	25494010	glycine-rich RNA-binding protein 4, mitochondrial
sly-u.5	101263820	organelle RRM domain-containing protein 6, chloroplastic
sot-r.1	102603763	RNA-binding motif protein, Y chromosome, family 1 member B-like
nta-r.1	107786594	organelle RRM domain-containing protein 2, mitochondrial-like
nta-r.1	107789147	organelle RRM domain-containing protein 1, chloroplastic

Annotation

functional annotation

KEGG

GO BP

GO:0000398 [list] [network] mRNA splicing, via spliceosome

(384 genes)

IEA

GO CC

GO:0005686 [list] [network] U2 snRNP	(61 genes)	IEA
GO:0071011 [list] [network] precatalytic spliceosome	(86 genes)	IEA
GO:0071013 [list] [network] catalytic step 2 spliceosome	(137 genes)	IEA

GO MF

GO:0003723 [list] [network] RNA binding

(3053 genes)

IEA

Protein

XP_016732038.2 [sequence] [blastp]
XP_016732040.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, mito 4	(predict for XP_016732038.2)
chlo 4, mito 4, chlo_mito 4	(predict for XP_016732040.2)

Subcellular
localization
TargetP

other 3	(predict for XP_016732038.2)
other 3	(predict for XP_016732040.2)

Gene expression

All samples

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107942830	ghi-r.1 for 107927659	ath-u.5 for AT5G19030	bra-r.6 for 103856361	cit-r.1 for 102626739	gma-u.5 for 100791917	vvi-u.5 for 100254593	mtr-u.5 for 25494010	sly-u.5 for 101263820	sot-r.1 for 102603763	nta-r.1 for 107786594	nta-r.1 for 107789147