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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107948264   protein SOSEKI 2 
 ghi-r.1   107927139   protein SOSEKI 2 
 ghi-r.1   121215582   protein SOSEKI 2 
 ghi-r.1   107893362   protein SOSEKI 2 
 ath-u.5   AT2G28150   UPSTREAM OF FLC protein (DUF966) 
 bra-r.6   103829712   protein UPSTREAM OF FLC 
 bna-r.1   106352571   protein SOSEKI 3-like 
 bna-r.1   106396504   protein SOSEKI 3 
 cit-r.1   102627983   protein SOSEKI 3 
 gma-u.5   100802920   protein SOSEKI 2 
 gma-u.5   100800618   protein SOSEKI 2 
 gma-u.5   100795715   protein SOSEKI 2 
 vvi-u.5   100253409   uncharacterized LOC100253409 
 ppo-u.5   18098247   protein SOSEKI 3 
 ppo-u.5   18101953   protein SOSEKI 3 
 mtr-u.5   11410740   protein UPSTREAM OF FLC 
 mtr-u.5   25487442   protein UPSTREAM OF FLC 
 sly-u.5   101262588   protein SOSEKI 3 
 sly-u.5   101255003   protein SOSEKI 3 
 sot-r.1   102604623   protein UPSTREAM OF FLC 
 sot-r.1   102591113   protein UPSTREAM OF FLC-like 
 nta-r.1   107783551   protein SOSEKI 3-like 
 nta-r.1   107763985   protein SOSEKI 3-like 
 nta-r.1   107797037   protein SOSEKI 3 
 osa-u.5   4346328   protein SOSEKI 3 
 osa-u.5   4333785   protein SOSEKI 3 
 zma-u.5   100279531   uncharacterized LOC100279531 
 zma-u.5   103628016   uncharacterized LOC103628016 
 zma-u.5   100191796   uncharacterized LOC100191796 
 tae-r.2   123087225   protein SOSEKI 3 
 tae-r.2   123090734   protein SOSEKI 3 
 hvu-r.1   123409104   protein SOSEKI 3-like 
 hvu-r.1   123447229   protein SOSEKI 3 
 sbi-r.1   8056934   uncharacterized LOC8056934 
 sbi-r.1   8062967   protein UPSTREAM OF FLC 
 bdi-r.1   100837491   uncharacterized LOC100837491 
 bdi-r.1   100835177   protein UPSTREAM OF FLC 

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Top 50 coexpressed genes to 107948264 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107948264 (ghi-r.1 coexpression data)

CoexMap"107948264"


ghiLOC107948264 | Entrez gene ID : 107948264    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 1 2 1 3 1 2 2 2 2 3 2 3 2 2 2 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_016738238.1 [sequence] [blastp]
XP_016738240.1 [sequence] [blastp]
XP_016738241.1 [sequence] [blastp]
XP_016738242.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1,  mito 1  (predict for XP_016738238.1)
nucl 6,  cyto 3,  cysk_nucl 3,  nucl_plas 3  (predict for XP_016738240.1)
nucl 9,  cyto 1,  mito 1  (predict for XP_016738241.1)
nucl 9,  cyto 1,  mito 1  (predict for XP_016738242.1)
Subcellular
localization
TargetP
other 8  (predict for XP_016738238.1)
other 8  (predict for XP_016738240.1)
other 8  (predict for XP_016738241.1)
other 8  (predict for XP_016738242.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107948264
ghi-r.1
for
107927139
ghi-r.1
for
121215582
ghi-r.1
for
107893362
ath-u.5
for
AT2G28150
bra-r.6
for
103829712
bna-r.1
for
106352571
bna-r.1
for
106396504
cit-r.1
for
102627983
gma-u.5
for
100802920
gma-u.5
for
100800618
gma-u.5
for
100795715
vvi-u.5
for
100253409
ppo-u.5
for
18098247
ppo-u.5
for
18101953
mtr-u.5
for
11410740
mtr-u.5
for
25487442
sly-u.5
for
101262588
sly-u.5
for
101255003
sot-r.1
for
102604623
sot-r.1
for
102591113
nta-r.1
for
107783551
nta-r.1
for
107763985
nta-r.1
for
107797037
osa-u.5
for
4346328
osa-u.5
for
4333785
zma-u.5
for
100279531
zma-u.5
for
103628016
zma-u.5
for
100191796
tae-r.2
for
123087225
tae-r.2
for
123090734
hvu-r.1
for
123409104
hvu-r.1
for
123447229
sbi-r.1
for
8056934
sbi-r.1
for
8062967
bdi-r.1
for
100837491
bdi-r.1
for
100835177


Ortholog ID: 3911
Species ghi ghi ghi ath bra bna bna cit gma gma gma vvi ppo ppo mtr mtr sly sly sot sot nta nta nta osa osa zma zma zma tae tae hvu hvu sbi sbi bdi bdi
Symbol LOC107927139 LOC121215582 LOC107893362 AT2G28150 LOC103829712 LOC106352571 LOC106396504 LOC102627983 LOC100802920 LOC100795715 LOC100783687 LOC100253409 LOC18098247 LOC18101953 LOC11410740 LOC25487442 LOC101262588 LOC101255003 LOC102604623 LOC102591113 LOC107783551 LOC107763985 LOC107797037 LOC4346328 LOC4333785 LOC100279531 LOC100191796 LOC103643835 LOC123090734 LOC123155777 LOC123409104 LOC123447229 LOC8056934 LOC8062967 LOC100837491 LOC100835177
Function* protein SOSEKI 2 protein SOSEKI 2 protein SOSEKI 2 UPSTREAM OF FLC protein (DUF966) protein UPSTREAM OF FLC protein SOSEKI 3-like protein SOSEKI 3 protein SOSEKI 3 protein SOSEKI 2 protein SOSEKI 2 protein SOSEKI 2 uncharacterized LOC100253409 protein SOSEKI 3 protein SOSEKI 3 protein UPSTREAM OF FLC protein UPSTREAM OF FLC protein SOSEKI 3 protein SOSEKI 3 protein UPSTREAM OF FLC protein UPSTREAM OF FLC-like protein SOSEKI 3-like protein SOSEKI 3-like protein SOSEKI 3 protein SOSEKI 3 protein SOSEKI 3 uncharacterized LOC100279531 uncharacterized LOC100191796 protein UPSTREAM OF FLC protein SOSEKI 3 protein SOSEKI 3 protein SOSEKI 3-like protein SOSEKI 3 uncharacterized LOC8056934 protein UPSTREAM OF FLC uncharacterized LOC100837491 protein UPSTREAM OF FLC
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 2
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03083 Polycomb repressive complex 2
sot04120 Ubiquitin mediated proteolysis 2
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04145 Phagosome 2
nta04148 Efferocytosis 2
nta04517 IgSF CAM signaling 2
nta04518 Integrin signaling 2
nta04620 Toll-like receptor signaling pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00520 Amino sugar and nucleotide sugar metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04814 Motor proteins 2
bdi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107927139 121215582 107893362 817361 103829712 106352571 106396504 102627983 100802920 100795715 100783687 100253409 18098247 18101953 11410740 25487442 101262588 101255003 102604623 102591113 107783551 107763985 107797037 4346328 4333785 100279531 100191796 103643835 123090734 123155777 123409104 123447229 8056934 8062967 100837491 100835177
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