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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1  107948563  lysine-rich arabinogalactan protein 18 
 ghi-r.1  107908860  classical arabinogalactan protein 9-like 
 ghi-r.1  107941225  lysine-rich arabinogalactan protein 18 
 ghi-r.1  107948566  lysine-rich arabinogalactan protein 18 
 ath-u.5  AGP17  arabinogalactan protein 17 
 ath-u.5  AGP18  arabinogalactan protein 18 
 bra-r.6  103862539  lysine-rich arabinogalactan protein 18 
 bra-r.6  103859760  lysine-rich arabinogalactan protein 18 
 bna-r.1  106432657  lysine-rich arabinogalactan protein 18 
 bna-r.1  106426821  lysine-rich arabinogalactan protein 18-like 
 bna-r.1  106407161  lysine-rich arabinogalactan protein 18 
 cit-r.1  102617997  lysine-rich arabinogalactan protein 18 
 gma-u.5  100778240  lysine-rich arabinogalactan protein 18 
 gma-u.5  100784565  uncharacterized LOC100784565 
 vvi-u.5  100252634  lysine-rich arabinogalactan protein 18 
 vvi-u.5  100252521  classical arabinogalactan protein 9 
 ppo-u.5  112327206  classical arabinogalactan protein 9 
 ppo-u.5  7478721  classical arabinogalactan protein 9 
 ppo-u.5  18099567  lysine-rich arabinogalactan protein 18 
 mtr-u.5  11407026  lysine-rich arabinogalactan protein 18 
 mtr-u.5  11409813  lysine-rich arabinogalactan protein 18 
 sly-u.5  101245805  classical arabinogalactan protein 9 
 sot-r.1  102594099  classical arabinogalactan protein 9 
 nta-r.1  107771591  uncharacterized LOC107771591 
 nta-r.1  107803038  uncharacterized LOC107803038 

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Top 50 coexpressed genes to 107948563 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107948563 (ghi-r.1 coexpression data)

CoexMap"107948563"


ghiLOC107948563 | Entrez gene ID : 107948563
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta cre hvu tae bdi osa zma sbi
Paralog 4 2 2 3 1 2 2 3 2 1 1 2 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005886 [list] [network] plasma membrane  (2553 genes)  IEA  
GO MF
Protein XP_016738639.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_016738639.1)
Subcellular
localization
TargetP
scret 2  (predict for XP_016738639.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

ghi-r.1
for
107948563


ghi-r.1
for
107908860


ghi-r.1
for
107941225


ghi-r.1
for
107948566


ath-u.5
for
AGP17


ath-u.5
for
AGP18


bra-r.6
for
103862539


bra-r.6
for
103859760


bna-r.1
for
106432657


bna-r.1
for
106426821


bna-r.1
for
106407161


cit-r.1
for
102617997


gma-u.5
for
100778240


gma-u.5
for
100784565


vvi-u.5
for
100252634


vvi-u.5
for
100252521


ppo-u.5
for
112327206


ppo-u.5
for
7478721


ppo-u.5
for
18099567


mtr-u.5
for
11407026


mtr-u.5
for
11409813


sly-u.5
for
101245805


sot-r.1
for
102594099


nta-r.1
for
107771591


nta-r.1
for
107803038



Ortholog ID: 5686
Species ghi ghi ghi ath ath bra bra bna bna bna cit gma gma vvi vvi ppo ppo ppo mtr mtr sly sot nta nta
Symbol LOC107948563 LOC121223168 LOC107900177 AGP17 AGP18 LOC103862539 LOC103859760 LOC106432657 LOC106426821 LOC106415009 LOC102617997 LOC100778240 LOC100815225 LOC100252634 LOC100252521 LOC112327206 LOC18099567 LOC18101147 LOC11407026 LOC11409813 LOC101245805 LOC102594099 LOC107771591 LOC107803038
Function* lysine-rich arabinogalactan protein 18 lysine-rich arabinogalactan protein 18 lysine-rich arabinogalactan protein 18 arabinogalactan protein 17 arabinogalactan protein 18 lysine-rich arabinogalactan protein 18 lysine-rich arabinogalactan protein 18 lysine-rich arabinogalactan protein 18 lysine-rich arabinogalactan protein 18-like lysine-rich arabinogalactan protein 18-like lysine-rich arabinogalactan protein 18 lysine-rich arabinogalactan protein 18 classical arabinogalactan protein 9-like lysine-rich arabinogalactan protein 18 classical arabinogalactan protein 9 classical arabinogalactan protein 9 lysine-rich arabinogalactan protein 18 lysine-rich arabinogalactan protein 18 lysine-rich arabinogalactan protein 18 lysine-rich arabinogalactan protein 18 classical arabinogalactan protein 9 classical arabinogalactan protein 9 uncharacterized LOC107771591 uncharacterized LOC107803038
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04814 Motor proteins 3
ppo04145 Phagosome 2
ppo04517 IgSF CAM signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00260 Glycine, serine and threonine metabolism 4
nta00630 Glyoxylate and dicarboxylate metabolism 4
nta00670 One carbon pool by folate 4
nta00785 Lipoic acid metabolism 4
nta01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107948563 121223168 107900177 816845 829900 103862539 103859760 106432657 106426821 106415009 102617997 100778240 100815225 100252634 100252521 112327206 18099567 18101147 11407026 11409813 101245805 102594099 107771591 107803038
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