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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107950308   RNA polymerase-associated protein CTR9 homolog 
 ghi-r.1   107885963   nucleolar protein 58 
 ath-u.5   AT5G60030   uncharacterized protein 
 ath-u.5   AT1G75335   nucleolar-like protein 
 bra-r.6   103856588   protein pxr1 
 bra-r.6   103851526   nucleolar protein 58 
 bna-r.1   106347476   nucleolar protein 58-like 
 bna-r.1   106385142   protein MNN4-like 
 bna-r.1   106407087   nucleolar protein 58-like 
 cit-r.1   102611717   uncharacterized LOC102611717 
 gma-u.5   100819175   spore wall protein 2 
 gma-u.5   100778066   uncharacterized LOC100778066 
 vvi-u.5   100259958   uncharacterized LOC100259958 
 ppo-u.5   18104587   uncharacterized LOC18104587 
 mtr-u.5   11438615   uncharacterized LOC11438615 
 mtr-u.5   11414512   protein PXR1 
 sly-u.5   101254869   uncharacterized LOC101254869 
 sot-r.1   102604496   protein pxr-1 
 nta-r.1   107816611   uncharacterized LOC107816611 
 nta-r.1   107825683   uncharacterized LOC107825683 

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Top 50 coexpressed genes to 107950308 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107950308 (ghi-r.1 coexpression data)

CoexMap"107950308"


ghiLOC107950308 | Entrez gene ID : 107950308    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta sbi osa tae hvu zma cre bdi
Paralog 2 2 2 3 1 2 1 1 2 1 1 2 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_016740616.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 4,  mito 1  (predict for XP_016740616.2)
Subcellular
localization
TargetP
chlo 3  (predict for XP_016740616.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107950308
ghi-r.1
for
107885963
ath-u.5
for
AT5G60030
ath-u.5
for
AT1G75335
bra-r.6
for
103856588
bra-r.6
for
103851526
bna-r.1
for
106347476
bna-r.1
for
106385142
bna-r.1
for
106407087
cit-r.1
for
102611717
gma-u.5
for
100819175
gma-u.5
for
100778066
vvi-u.5
for
100259958
ppo-u.5
for
18104587
mtr-u.5
for
11438615
mtr-u.5
for
11414512
sly-u.5
for
101254869
sot-r.1
for
102604496
nta-r.1
for
107816611
nta-r.1
for
107825683


Ortholog ID: 11767
Species ghi ghi ath ath bra bra bna bna bna cit gma gma vvi ppo mtr mtr sly sot nta nta
Symbol LOC107950308 LOC107885963 AT5G60030 AT1G75335 LOC103856588 LOC103851526 LOC106347476 LOC106407087 LOC106419540 LOC102611717 LOC100819175 LOC100778066 LOC100259958 LOC18104587 LOC11438615 LOC11414512 LOC101254869 LOC102604496 LOC107816611 LOC107825683
Function* RNA polymerase-associated protein CTR9 homolog nucleolar protein 58 uncharacterized protein nucleolar-like protein protein pxr1 nucleolar protein 58 nucleolar protein 58-like nucleolar protein 58-like nucleolar protein 58 uncharacterized LOC102611717 spore wall protein 2 uncharacterized LOC100778066 uncharacterized LOC100259958 uncharacterized LOC18104587 uncharacterized LOC11438615 protein PXR1 uncharacterized LOC101254869 protein pxr-1 uncharacterized LOC107816611 uncharacterized LOC107825683
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107950308 107885963 836125 6240462 103856588 103851526 106347476 106407087 106419540 102611717 100819175 100778066 100259958 18104587 11438615 11414512 101254869 102604496 107816611 107825683
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