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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1  107954700  U-box domain-containing protein 15 
 ghi-r.1  107952835  U-box domain-containing protein 15 
 ath-u.5  AT4G12710  ARM repeat superfamily protein 
 cit-r.1  102608568  U-box domain-containing protein 3 
 gma-u.5  100785760  U-box domain-containing protein 15 
 gma-u.5  100782472  U-box domain-containing protein 15 
 vvi-u.5  100261296  U-box domain-containing protein 3 
 ppo-u.5  7469341  U-box domain-containing protein 15 
 mtr-u.5  11408569  U-box domain-containing protein 15 
 sly-u.5  101265841  U-box domain-containing protein 3 
 sot-r.1  102606131  U-box domain-containing protein 15 
 nta-r.1  107814322  uncharacterized LOC107814322 
 nta-r.1  107825186  uncharacterized LOC107825186 

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Top 50 coexpressed genes to 107954700 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107954700 (ghi-r.1 coexpression data)

CoexMap"107954700"


ghiLOC107954700 | Entrez gene ID : 107954700
Species ghi ath cit gma vvi ppo mtr sly sot nta sbi osa bra tae bna hvu zma cre bdi
Paralog 2 1 1 2 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016745824.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 3,  chlo 3,  nucl_plas 2,  cyto 2,  nucl 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_016745824.1)
Subcellular
localization
TargetP
other 9  (predict for XP_016745824.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

ghi-r.1
for
107954700


ghi-r.1
for
107952835


ath-u.5
for
AT4G12710


cit-r.1
for
102608568


gma-u.5
for
100785760


gma-u.5
for
100782472


vvi-u.5
for
100261296


ppo-u.5
for
7469341


mtr-u.5
for
11408569


sly-u.5
for
101265841


sot-r.1
for
102606131


nta-r.1
for
107814322


nta-r.1
for
107825186



Ortholog ID: 14033
Species ghi ghi ath cit gma gma vvi ppo mtr sly sot nta nta
Symbol LOC107954700 LOC107952835 AT4G12710 LOC102608568 LOC100785760 LOC100782472 LOC100261296 LOC7469341 LOC11408569 LOC101265841 LOC102606131 LOC107814322 LOC107825186
Function* U-box domain-containing protein 15 U-box domain-containing protein 15 ARM repeat superfamily protein U-box domain-containing protein 3 U-box domain-containing protein 15 U-box domain-containing protein 15 U-box domain-containing protein 3 U-box domain-containing protein 15 U-box domain-containing protein 15 U-box domain-containing protein 3 U-box domain-containing protein 15 uncharacterized LOC107814322 uncharacterized LOC107825186
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00908 Zeatin biosynthesis 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107954700 107952835 826883 102608568 100785760 100782472 100261296 7469341 11408569 101265841 102606131 107814322 107825186
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