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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107958014   pre-mRNA-splicing ATP-dependent RNA helicase prp28 
 ghi-r.1   107918154   cullin-1 
 ghi-r.1   121208281   cullin-1 

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Top 50 coexpressed genes to 107958014 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107958014 (ghi-r.1 coexpression data)

CoexMap"107958014"


ghiLOC107958014 | Entrez gene ID : 107958014    
Species ghi hvu sbi sly zma cre ppo nta osa mtr cit bna bra gma tae vvi bdi ath sot
Paralog 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03013 [list] [network] Nucleocytoplasmic transport (289 genes)
ghi03015 [list] [network] mRNA surveillance pathway (365 genes)
ghi03040 [list] [network] Spliceosome (739 genes)
GO BP
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (782 genes)  IEA  
GO CC
GO:0071013 [list] [network] catalytic step 2 spliceosome  (137 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (469 genes)  IEA  
GO MF
GO:0031625 [list] [network] ubiquitin protein ligase binding  (108 genes)  IEA  
GO:0003724 [list] [network] RNA helicase activity  (165 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (890 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (5155 genes)  IEA  
Protein XP_040971580.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  chlo 4,  nucl 1,  vacu 1  (predict for XP_040971580.1)
Subcellular
localization
TargetP
other 8  (predict for XP_040971580.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107958014
ghi-r.1
for
107918154
ghi-r.1
for
121208281


Ortholog ID: 27635
Species ghi ghi ghi
Symbol LOC107958014 LOC107918154 LOC121208281
Function* pre-mRNA-splicing ATP-dependent RNA helicase prp28 cullin-1 cullin-1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 7
ghi03015 mRNA surveillance pathway 7
ghi03040 Spliceosome 7
ghi03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 5
ghi03015 mRNA surveillance pathway 5
ghi03040 Spliceosome 5
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107958014 107918154 121208281
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