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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107958121   cold-regulated protein 27 
 ghi-r.1   107905573   cold-regulated protein 27 
 ghi-r.1   107910225   cold-regulated protein 27 
 ghi-r.1   121218172   cold-regulated protein 27 
 ath-u.5   COR27   cold regulated protein 27 
 bra-r.6   103839269   cold-regulated protein 27 
 bra-r.6   103828008   cold-regulated protein 27 
 bna-r.1   106404570   cold-regulated protein 27 
 bna-r.1   106390157   cold-regulated protein 27 
 bna-r.1   106349536   cold-regulated protein 27 
 cit-r.1   102617318   cold-regulated protein 27 
 cit-r.1   102610375   cold-regulated protein 27 
 gma-u.5   100814610   cold-regulated protein 27 
 gma-u.5   100806882   cold-regulated protein 27 
 gma-u.5   100801828   cold-regulated protein 27 
 vvi-u.5   100267847   cold-regulated protein 27 
 vvi-u.5   100255572   cold-regulated protein 27 
 vvi-u.5   100854716   hypothetical protein 
 ppo-u.5   18104891   cold-regulated protein 27 
 ppo-u.5   7457536   cold-regulated protein 27 
 mtr-u.5   11412566   cold-regulated protein 27 
 mtr-u.5   11443438   cold-regulated protein 28 
 sly-u.5   101253889   cold-regulated protein 27 
 sot-r.1   102596791   uncharacterized LOC102596791 
 nta-r.1   107794357   cold-regulated protein 27 
 nta-r.1   107831215   cold-regulated protein 27-like 
 osa-u.5   4331855   uncharacterized LOC4331855 
 osa-u.5   4348520   cold-regulated protein 27 
 zma-u.5   100274071   uncharacterized LOC100274071 
 zma-u.5   100192612   uncharacterized LOC100192612 
 zma-u.5   100193895   uncharacterized LOC100193895 
 tae-r.2   123099237   cold-regulated protein 27 
 tae-r.2   123052779   uncharacterized LOC123052779 
 tae-r.2   123081522   cold-regulated protein 27 
 hvu-r.1   123449635   cold-regulated protein 28-like 
 hvu-r.1   123447569   uncharacterized LOC123447569 
 sbi-r.1   110437142   uncharacterized LOC110437142 
 bdi-r.1   100830358   uncharacterized LOC100830358 

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Top 50 coexpressed genes to 107958121 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107958121 (ghi-r.1 coexpression data)

CoexMap"107958121"


ghiLOC107958121 | Entrez gene ID : 107958121    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 2 3 2 3 3 2 2 1 1 2 2 3 3 2 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009409 [list] [network] response to cold  (54 genes)  IEA  
GO:0042752 [list] [network] regulation of circadian rhythm  (63 genes)  IEA  
GO CC
GO MF
Protein XP_016749284.1 [sequence] [blastp]
XP_016749285.1 [sequence] [blastp]
XP_016749286.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 3  (predict for XP_016749284.1)
nucl 6,  chlo 3  (predict for XP_016749285.1)
nucl 6,  chlo 3  (predict for XP_016749286.1)
Subcellular
localization
TargetP
other 6  (predict for XP_016749284.1)
other 6  (predict for XP_016749285.1)
other 6  (predict for XP_016749286.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107958121
ghi-r.1
for
107905573
ghi-r.1
for
107910225
ghi-r.1
for
121218172
ath-u.5
for
COR27
bra-r.6
for
103839269
bra-r.6
for
103828008
bna-r.1
for
106404570
bna-r.1
for
106390157
bna-r.1
for
106349536
cit-r.1
for
102617318
cit-r.1
for
102610375
gma-u.5
for
100814610
gma-u.5
for
100806882
gma-u.5
for
100801828
vvi-u.5
for
100267847
vvi-u.5
for
100255572
vvi-u.5
for
100854716
ppo-u.5
for
18104891
ppo-u.5
for
7457536
mtr-u.5
for
11412566
mtr-u.5
for
11443438
sly-u.5
for
101253889
sot-r.1
for
102596791
nta-r.1
for
107794357
nta-r.1
for
107831215
osa-u.5
for
4331855
osa-u.5
for
4348520
zma-u.5
for
100274071
zma-u.5
for
100192612
zma-u.5
for
100193895
tae-r.2
for
123099237
tae-r.2
for
123052779
tae-r.2
for
123081522
hvu-r.1
for
123449635
hvu-r.1
for
123447569
sbi-r.1
for
110437142
bdi-r.1
for
100830358


Ortholog ID: 3267
Species ghi ath bra bra bna bna bna cit cit gma gma gma vvi vvi vvi ppo ppo mtr mtr sly sot nta nta osa osa zma zma zma tae tae tae hvu hvu sbi bdi
Symbol LOC107905573 COR27 LOC103839269 LOC103828008 LOC106404570 LOC106390157 BNAANNG40190D LOC102617318 LOC102610375 LOC100814610 LOC100801828 LOC100781222 LOC100267847 LOC100255572 LOC100854716 LOC18104891 LOC7457536 LOC11412566 LOC11443438 LOC101253889 LOC102596791 LOC107794357 LOC107831215 LOC4331855 LOC4348520 LOC100274071 LOC100192612 LOC100193895 LOC123081522 LOC123094036 LOC123098692 LOC123449635 LOC123447569 LOC110437142 LOC100830358
Function* cold-regulated protein 27 cold regulated protein 27 cold-regulated protein 27 cold-regulated protein 27 cold-regulated protein 27 cold-regulated protein 27 cold-regulated protein 27 cold-regulated protein 27 cold-regulated protein 27 cold-regulated protein 27 cold-regulated protein 27 cold-regulated protein 27 cold-regulated protein 27 cold-regulated protein 27 hypothetical protein cold-regulated protein 27 cold-regulated protein 27 cold-regulated protein 27 cold-regulated protein 28 cold-regulated protein 27 uncharacterized LOC102596791 cold-regulated protein 27 cold-regulated protein 27-like uncharacterized LOC4331855 cold-regulated protein 27 uncharacterized LOC100274071 uncharacterized LOC100192612 uncharacterized LOC100193895 cold-regulated protein 27 uncharacterized LOC123094036 cold-regulated protein 27 cold-regulated protein 28-like uncharacterized LOC123447569 uncharacterized LOC110437142 uncharacterized LOC100830358
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 2
bra00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04016 MAPK signaling pathway - plant 2
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04016 MAPK signaling pathway - plant 2
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04712 Circadian rhythm - plant 4
sbi00730 Thiamine metabolism 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04712 Circadian rhythm - plant 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107905573 834301 103839269 103828008 106404570 106390157 106447068 102617318 102610375 100814610 100801828 100781222 100267847 100255572 100854716 18104891 7457536 11412566 11443438 101253889 102596791 107794357 107831215 4331855 4348520 100274071 100192612 100193895 123081522 123094036 123098692 123449635 123447569 110437142 100830358
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