ATTED-II : GeneCoexpression result

Species	Gene	Description
ghi-r.1	107962079	uncharacterized protein ycf33
ghi-r.1	107901821	uncharacterized LOC107901821
bra-r.6	103860845	uncharacterized LOC103860845
bna-r.1	106440295	uncharacterized LOC106440295
cit-r.1	102616242	uncharacterized LOC102616242
gma-u.5	100800026	uncharacterized LOC100800026
gma-u.5	100795024	uncharacterized LOC100795024
vvi-u.5	100854249	uncharacterized LOC100854249
ppo-u.5	7463700	uncharacterized LOC7463700
mtr-u.5	11439079	uncharacterized LOC11439079
sly-u.5	101263778	uncharacterized LOC101263778
sot-r.1	102587938	uncharacterized LOC102587938
osa-u.5	4343859	uncharacterized LOC4343859
zma-u.5	100277918	uncharacterized LOC100277918
zma-u.5	100275996	uncharacterized LOC100275996
tae-r.2	123157030	peroxiredoxin Q, chloroplastic-like
tae-r.2	123164724	peroxiredoxin Q, chloroplastic-like
tae-r.2	606328	peroxiredoxin Q, chloroplastic-like
hvu-r.1	123411199	peroxiredoxin Q, chloroplastic
sbi-r.1	8073725	uncharacterized LOC8073725
bdi-r.1	100838766	peroxiredoxin Q, chloroplastic
cre-r.1	CHLRE_17g726450v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_016753804.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, vacu 4, plas 1, extr 1, E.R. 1, nucl_plas 1, golg_plas 1, cysk_plas 1, mito_plas 1, cyto_plas 1

(predict for XP_016753804.2)

Subcellular
localization
TargetP

other 3

(predict for XP_016753804.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107962079	ghi-r.1 for 107901821	bra-r.6 for 103860845	bna-r.1 for 106440295	cit-r.1 for 102616242	gma-u.5 for 100800026	gma-u.5 for 100795024	vvi-u.5 for 100854249	ppo-u.5 for 7463700	mtr-u.5 for 11439079	sly-u.5 for 101263778	sot-r.1 for 102587938	osa-u.5 for 4343859	zma-u.5 for 100277918	zma-u.5 for 100275996	tae-r.2 for 123157030	tae-r.2 for 123164724	tae-r.2 for 606328	hvu-r.1 for 123411199	sbi-r.1 for 8073725	bdi-r.1 for 100838766	cre-r.1 for CHLRE_17g726450v5

Ortholog

Ortholog ID: 10189

Species

ghi

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized protein ycf33

uncharacterized LOC107901821

uncharacterized LOC103860845

uncharacterized LOC106440295

uncharacterized LOC102616242

uncharacterized LOC100800026

uncharacterized LOC100795024

uncharacterized LOC100854249

uncharacterized LOC7463700

uncharacterized LOC11439079

uncharacterized LOC101263778

uncharacterized LOC102587938

uncharacterized LOC4343859

uncharacterized LOC100277918

uncharacterized LOC100275996

peroxiredoxin Q, chloroplastic-like

peroxiredoxin Q, chloroplastic

uncharacterized LOC8073725

peroxiredoxin Q, chloroplastic

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00195	Photosynthesis	9
ghi00196	Photosynthesis - antenna proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00195	Photosynthesis	9
ghi00196	Photosynthesis - antenna proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	5
bra00195	Photosynthesis	2
bra00260	Glycine, serine and threonine metabolism	2
bra00630	Glyoxylate and dicarboxylate metabolism	2
bra00670	One carbon pool by folate	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00710	Carbon fixation by Calvin cycle	6
bna01200	Carbon metabolism	6
bna00195	Photosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit01200	Carbon metabolism	3
cit00030	Pentose phosphate pathway	2
cit00710	Carbon fixation by Calvin cycle	2
cit00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	5
gma00195	Photosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	4
vvi00195	Photosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00195	Photosynthesis	8
ppo00196	Photosynthesis - antenna proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	4
mtr00190	Oxidative phosphorylation	2
mtr00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00195	Photosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00195	Photosynthesis	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00620	Pyruvate metabolism	3
tae00195	Photosynthesis	3
tae00710	Carbon fixation by Calvin cycle	2
tae01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00195	Photosynthesis	3
tae00010	Glycolysis / Gluconeogenesis	3
tae00030	Pentose phosphate pathway	3
tae00051	Fructose and mannose metabolism	3
tae00710	Carbon fixation by Calvin cycle	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00195	Photosynthesis	2
tae00710	Carbon fixation by Calvin cycle	2
tae01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00195	Photosynthesis	2
hvu03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00196	Photosynthesis - antenna proteins	10
sbi00195	Photosynthesis	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01200	Carbon metabolism	5
bdi00710	Carbon fixation by Calvin cycle	4
bdi03010	Ribosome	3
bdi01230	Biosynthesis of amino acids	2
bdi00630	Glyoxylate and dicarboxylate metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

107962079

107901821

103860845

106440295

102616242

100800026

100795024

100854249

7463700

11439079

101263778

102587938

4343859

100277918

100275996

123157030

123164724

606328

123411199

8073725

100838766

5722792

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 107962079 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107962079 (ghi-r.1 coexpression data)


Species	ghi	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	osa	zma	tae	hvu	sbi	bdi	cre	nta	ath
Paralog	2	1	1	1	2	1	1	1	1	1	1	2	3	1	1	1	1	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107962079 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107962079 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**