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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107962834   phosphoserine phosphatase, chloroplastic 
 ghi-r.1   107899356   phosphoserine phosphatase, chloroplastic 
 ghi-r.1   107931250   phosphoserine phosphatase, chloroplastic 
 ghi-r.1   107948997   phosphoserine phosphatase, chloroplastic 

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Top 50 coexpressed genes to 107962834 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107962834 (ghi-r.1 coexpression data)

CoexMap"107962834"


ghiLOC107962834 | Entrez gene ID : 107962834    
Species ghi osa sot sly cit ath bna ppo bdi sbi gma mtr bra tae hvu vvi zma cre nta
Paralog 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00260 [list] [network] Glycine, serine and threonine metabolism (150 genes)
ghi01200 [list] [network] Carbon metabolism (681 genes)
ghi01230 [list] [network] Biosynthesis of amino acids (568 genes)
GO BP
GO:0006564 [list] [network] L-serine biosynthetic process  (16 genes)  IEA  
GO:0006096 [list] [network] glycolytic process  (143 genes)  IEA  
GO:0016311 [list] [network] dephosphorylation  (428 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (1647 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (13864 genes)  IEA  
GO MF
GO:0036424 [list] [network] L-phosphoserine phosphatase activity  (6 genes)  IEA  
GO:0004618 [list] [network] phosphoglycerate kinase activity  (7 genes)  IEA  
GO:0000287 [list] [network] magnesium ion binding  (292 genes)  IEA  
Protein XP_016754858.2 [sequence] [blastp]
XP_016754860.2 [sequence] [blastp]
XP_016754861.2 [sequence] [blastp]
XP_016754867.2 [sequence] [blastp]
XP_040971083.1 [sequence] [blastp]
XP_040971084.1 [sequence] [blastp]
XP_040971085.1 [sequence] [blastp]
XP_040971086.1 [sequence] [blastp]
XP_040971087.1 [sequence] [blastp]
XP_040971088.1 [sequence] [blastp]
XP_040971089.1 [sequence] [blastp]
XP_040971090.1 [sequence] [blastp]
XP_040971091.1 [sequence] [blastp]
XP_040971092.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 3,  cysk_nucl 3  (predict for XP_016754858.2)
nucl 4,  cyto 3,  cysk_nucl 3  (predict for XP_016754860.2)
nucl 4,  cyto 3,  cysk_nucl 3  (predict for XP_016754861.2)
cyto 6,  nucl 2,  chlo 1,  cysk 1  (predict for XP_016754867.2)
nucl 4,  cyto 3,  cysk_nucl 3  (predict for XP_040971083.1)
nucl 4,  cyto 3,  cysk_nucl 3  (predict for XP_040971084.1)
nucl 4,  cyto 3,  cysk_nucl 3  (predict for XP_040971085.1)
nucl 4,  cyto 3,  cysk_nucl 3  (predict for XP_040971086.1)
nucl 4,  cyto 3,  cysk_nucl 3  (predict for XP_040971087.1)
nucl 4,  cyto 3,  cysk_nucl 3  (predict for XP_040971088.1)
cyto 6,  nucl 1,  chlo 1,  E.R. 1,  pero 1,  golg 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_040971089.1)
cyto 6,  nucl 1,  chlo 1,  E.R. 1,  pero 1,  golg 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_040971090.1)
cyto 6,  nucl 1,  chlo 1,  E.R. 1,  pero 1,  golg 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_040971091.1)
cyto 6,  nucl 2,  chlo 1,  cysk 1  (predict for XP_040971092.1)
Subcellular
localization
TargetP
other 9  (predict for XP_016754858.2)
other 9  (predict for XP_016754860.2)
other 9  (predict for XP_016754861.2)
other 8  (predict for XP_016754867.2)
other 9  (predict for XP_040971083.1)
other 9  (predict for XP_040971084.1)
other 9  (predict for XP_040971085.1)
other 9  (predict for XP_040971086.1)
other 9  (predict for XP_040971087.1)
other 9  (predict for XP_040971088.1)
other 9  (predict for XP_040971089.1)
other 9  (predict for XP_040971090.1)
other 9  (predict for XP_040971091.1)
other 8  (predict for XP_040971092.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107962834
ghi-r.1
for
107899356
ghi-r.1
for
107931250
ghi-r.1
for
107948997


Ortholog ID: 24144
Species ghi ghi ghi
Symbol LOC107962834 LOC107931250 LOC107948997
Function* phosphoserine phosphatase, chloroplastic phosphoserine phosphatase, chloroplastic phosphoserine phosphatase, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 5
ghi01230 Biosynthesis of amino acids 5
ghi00260 Glycine, serine and threonine metabolism 3
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 5
ghi01230 Biosynthesis of amino acids 5
ghi00260 Glycine, serine and threonine metabolism 3
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00710 Carbon fixation by Calvin cycle 2
Expression Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107962834 107931250 107948997
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