ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	121214041	uncharacterized LOC121214041
ghi-r.1	107928431	uncharacterized LOC107928431
ghi-r.1	107896775	uncharacterized LOC107896775
ghi-r.1	107914598	uncharacterized LOC107914598
ath-u.5	AT3G02640	uncharacterized protein
ath-u.5	AT5G16250	uncharacterized protein
ath-u.5	AT5G36710	uncharacterized protein
bra-r.6	103856188	uncharacterized LOC103856188
bra-r.6	103846341	uncharacterized LOC103846341
bra-r.6	103849166	uncharacterized LOC103849166
bna-r.1	111210991	uncharacterized LOC111210991
bna-r.1	106370516	uncharacterized LOC106370516
bna-r.1	BNAC04G30030D	uncharacterized BNAC04G30030D
cit-r.1	102610254	uncharacterized LOC102610254
cit-r.1	102608877	hypothetical protein
gma-u.5	100500130	uncharacterized LOC100500130
gma-u.5	100527525	uncharacterized LOC100527525
vvi-u.5	100267455	uncharacterized LOC100267455
ppo-u.5	7472467	uncharacterized LOC7472467
ppo-u.5	18108512	uncharacterized LOC18108512
ppo-u.5	7474391	uncharacterized LOC7474391
mtr-u.5	11408295	uncharacterized LOC11408295
mtr-u.5	11437434	uncharacterized LOC11437434
sly-u.5	101250852	uncharacterized LOC101250852
sot-r.1	102597399	uncharacterized LOC102597399
sot-r.1	102604205	uncharacterized LOC102604205
nta-r.1	107762322	uncharacterized LOC107762322
nta-r.1	107787822	uncharacterized LOC107787822
nta-r.1	107801076	uncharacterized LOC107801076
osa-u.5	4339260	uncharacterized LOC4339260
osa-u.5	4336278	uncharacterized LOC4336278
osa-u.5	4325096	uncharacterized LOC4325096
zma-u.5	100382175	uncharacterized LOC100382175
zma-u.5	100277515	uncharacterized LOC100277515
zma-u.5	100277214	uncharacterized LOC100277214
tae-r.2	123066062	uncharacterized LOC123066062
tae-r.2	123041587	uncharacterized LOC123041587
tae-r.2	123053767	uncharacterized LOC123053767
hvu-r.1	123430472	uncharacterized LOC123430472
hvu-r.1	123415852	uncharacterized LOC123415852
hvu-r.1	123440607	uncharacterized LOC123440607
sbi-r.1	8078672	uncharacterized LOC8078672
sbi-r.1	8067484	uncharacterized LOC8067484
sbi-r.1	8060199	uncharacterized LOC8060199
bdi-r.1	100838770	uncharacterized LOC100838770
bdi-r.1	100844835	uncharacterized LOC100844835

Top 50 coexpressed genes to 121214041 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 121214041 (ghi-r.1 coexpression data)

CoexMap"121214041"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_040943605.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, plas 3, mito 1, cyto_mito 1, extr 1, E.R. 1, pero 1

(predict for XP_040943605.1)

Subcellular
localization
TargetP

mito 5

(predict for XP_040943605.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 121214041	ghi-r.1 for 107928431	ghi-r.1 for 107896775	ghi-r.1 for 107914598	ath-u.5 for AT3G02640	ath-u.5 for AT5G16250	ath-u.5 for AT5G36710	bra-r.6 for 103856188	bra-r.6 for 103846341	bra-r.6 for 103849166	bna-r.1 for 111210991	bna-r.1 for 106370516	bna-r.1 for BNAC04G30030D	cit-r.1 for 102610254	cit-r.1 for 102608877	gma-u.5 for 100500130	gma-u.5 for 100527525	vvi-u.5 for 100267455	ppo-u.5 for 7472467	ppo-u.5 for 18108512	ppo-u.5 for 7474391	mtr-u.5 for 11408295	mtr-u.5 for 11437434	sly-u.5 for 101250852	sot-r.1 for 102597399	sot-r.1 for 102604205	nta-r.1 for 107762322	nta-r.1 for 107787822	nta-r.1 for 107801076	osa-u.5 for 4339260	osa-u.5 for 4336278	osa-u.5 for 4325096	zma-u.5 for 100382175	zma-u.5 for 100277515	zma-u.5 for 100277214	tae-r.2 for 123066062	tae-r.2 for 123041587	tae-r.2 for 123053767	hvu-r.1 for 123430472	hvu-r.1 for 123415852	hvu-r.1 for 123440607	sbi-r.1 for 8078672	sbi-r.1 for 8067484	sbi-r.1 for 8060199	bdi-r.1 for 100838770	bdi-r.1 for 100844835

Ortholog

Ortholog ID: 2033

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC121214041

uncharacterized LOC107914598

uncharacterized LOC121223507

uncharacterized protein

uncharacterized LOC103856188

uncharacterized LOC103846341

uncharacterized LOC103849166

uncharacterized LOC106372206

uncharacterized LOC106399299

uncharacterized LOC106443153

uncharacterized LOC102610254

hypothetical protein

uncharacterized LOC100500130

uncharacterized LOC100527525

uncharacterized LOC100267455

uncharacterized LOC7472467

uncharacterized LOC18108512

uncharacterized LOC18104599

uncharacterized LOC11408295

uncharacterized LOC11437434

uncharacterized LOC101250852

uncharacterized LOC102597399

uncharacterized LOC102604205

uncharacterized LOC107787822

uncharacterized LOC107830826

uncharacterized LOC4339260

uncharacterized LOC4336278

uncharacterized LOC4325096

uncharacterized LOC100277515

uncharacterized LOC100277137

uncharacterized LOC100192825

uncharacterized LOC123041587

uncharacterized LOC123075117

uncharacterized LOC123430472

uncharacterized LOC123415852

uncharacterized LOC123440607

uncharacterized LOC8078672

uncharacterized LOC8067484

uncharacterized LOC8060199

uncharacterized LOC100838770

uncharacterized LOC100844835

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04130	SNARE interactions in vesicular transport	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04120	Ubiquitin mediated proteolysis	2
cit03030	DNA replication	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04145	Phagosome	2
vvi04517	IgSF CAM signaling	2
vvi04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04814	Motor proteins	3
ppo04145	Phagosome	2
ppo04517	IgSF CAM signaling	2
ppo00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04145	Phagosome	2
ppo04517	IgSF CAM signaling	2
ppo04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04120	Ubiquitin mediated proteolysis	2
sly04130	SNARE interactions in vesicular transport	2
sly04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	2
nta00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00270	Cysteine and methionine metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

121214041

107914598

121223507

821289

833636

833647

103856188

103846341

103849166

106372206

106399299

106443153

102610254

102608877

100500130

100527525

100267455

7472467

18108512

18104599

11408295

11437434

101250852

102597399

102604205

107787822

107830826

4339260

4336278

4325096

100277515

100277137

100192825

123041587

123075117

123430472

123415852

123440607

8078672

8067484

8060199

100838770

100844835

The preparation time of this page was 0.2 [sec].


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	3	3	2	2	1	3	2	1	2	3	3	3	3	3	3	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 121214041 (ghi-r.1 coexpression data)

Top 50 enrichment test to 121214041 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**