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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   121216079   pentatricopeptide repeat-containing protein At2g03380, mitochondrial 
 ghi-r.1   107897378   pentatricopeptide repeat-containing protein At2g03380, mitochondrial 
 mtr-u.5   25482946   pentatricopeptide repeat-containing protein At4g21300 
 osa-u.5   4326018   putative pentatricopeptide repeat-containing protein At3g01580 
 osa-u.5   9271215   pentatricopeptide repeat-containing protein At4g21300 
 zma-u.5   100273888   Pentatricopeptide (PPR) repeat-containing protein-like 
 tae-r.2   123169446   pentatricopeptide repeat-containing protein At5g27110 
 hvu-r.1   123411761   pentatricopeptide repeat-containing protein At4g21300-like 
 sbi-r.1   8066032   putative pentatricopeptide repeat-containing protein At3g01580 

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Top 50 coexpressed genes to 121216079 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 121216079 (ghi-r.1 coexpression data)

CoexMap"121216079"


ghiLOC121216079 | Entrez gene ID : 121216079    
Species ghi mtr osa zma tae hvu sbi gma sly sot cit bra ath bna ppo vvi cre nta bdi
Paralog 2 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (557 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (14879 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (3053 genes)  IEA  
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_040947302.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 3,  nucl 1,  chlo_mito 1  (predict for XP_040947302.1)
Subcellular
localization
TargetP
other 1  (predict for XP_040947302.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
121216079
ghi-r.1
for
107897378
mtr-u.5
for
25482946
osa-u.5
for
4326018
osa-u.5
for
9271215
zma-u.5
for
100273888
tae-r.2
for
123169446
hvu-r.1
for
123411761
sbi-r.1
for
8066032


Ortholog ID: 14175
Species ghi ghi mtr osa osa zma tae hvu sbi
Symbol LOC121216079 LOC107897378 LOC25482946 LOC4326018 LOC9271215 LOC100273888 LOC123169446 LOC123411761 LOC8066032
Function* pentatricopeptide repeat-containing protein At2g03380, mitochondrial pentatricopeptide repeat-containing protein At2g03380, mitochondrial pentatricopeptide repeat-containing protein At4g21300 putative pentatricopeptide repeat-containing protein At3g01580 pentatricopeptide repeat-containing protein At4g21300 Pentatricopeptide (PPR) repeat-containing protein-like pentatricopeptide repeat-containing protein At5g27110 pentatricopeptide repeat-containing protein At4g21300-like putative pentatricopeptide repeat-containing protein At3g01580
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 6
mtr03020 RNA polymerase 2
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 121216079 107897378 25482946 4326018 9271215 100273888 123169446 123411761 8066032
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