ATTED-II : GeneCoexpression result

Species	Gene	Description
ghi-r.1	121223504	uncharacterized LOC121223504
ghi-r.1	121209474	uncharacterized LOC121209474
ath-u.5	AT2G25625	histone deacetylase-like protein
bra-r.6	103864682	uncharacterized LOC103864682
bna-r.1	106394614	uncharacterized LOC106394614
bna-r.1	106449988	uncharacterized LOC106449988
cit-r.1	102609753	protein CHLOROPLAST VESICULATION
gma-u.5	100805091	uncharacterized LOC100805091
gma-u.5	102661561	uncharacterized LOC102661561
vvi-u.5	100261242	protein CHLOROPLAST VESICULATION
ppo-u.5	7495748	protein CHLOROPLAST VESICULATION
mtr-u.5	11429975	uncharacterized LOC11429975
sot-r.1	102591109	uncharacterized LOC102591109
nta-r.1	107760942	protein CHLOROPLAST VESICULATION
nta-r.1	107811787	protein CHLOROPLAST VESICULATION
osa-u.5	4339688	uncharacterized LOC4339688
zma-u.5	100275322	uncharacterized LOC100275322
zma-u.5	109940239	uncharacterized LOC109940239
tae-r.2	123182126	uncharacterized LOC123182126
tae-r.2	123177238	uncharacterized LOC123177238
hvu-r.1	123420348	uncharacterized LOC123420348

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_040961004.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 5, nucl 3, mito 1, cyto_nucl 1, cysk_nucl 1, nucl_plas 1

(predict for XP_040961004.1)

Subcellular
localization
TargetP

chlo 6, other 3

(predict for XP_040961004.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 121223504	ghi-r.1 for 121209474	ath-u.5 for AT2G25625	bra-r.6 for 103864682	bna-r.1 for 106394614	bna-r.1 for 106449988	cit-r.1 for 102609753	gma-u.5 for 100805091	gma-u.5 for 102661561	vvi-u.5 for 100261242	ppo-u.5 for 7495748	mtr-u.5 for 11429975	sot-r.1 for 102591109	nta-r.1 for 107760942	nta-r.1 for 107811787	osa-u.5 for 4339688	zma-u.5 for 100275322	zma-u.5 for 109940239	tae-r.2 for 123182126	tae-r.2 for 123177238	hvu-r.1 for 123420348

Ortholog

Ortholog ID: 10675

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sot

nta

osa

zma

tae

hvu

Symbol

Function^*

uncharacterized LOC121223504

uncharacterized LOC121209474

histone deacetylase-like protein

uncharacterized LOC103864682

uncharacterized LOC106394614

uncharacterized LOC106449988

protein CHLOROPLAST VESICULATION

uncharacterized LOC100805091

uncharacterized LOC102661561

protein CHLOROPLAST VESICULATION

uncharacterized LOC11429975

uncharacterized LOC102591109

protein CHLOROPLAST VESICULATION

uncharacterized LOC4339688

uncharacterized LOC100275322

uncharacterized LOC109940239

uncharacterized LOC123182126

uncharacterized LOC123177238

uncharacterized LOC123420348

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00906	Carotenoid biosynthesis	2
ghi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04016	MAPK signaling pathway - plant	3
bra04075	Plant hormone signal transduction	3
bra04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00860	Porphyrin metabolism	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00860	Porphyrin metabolism	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00564	Glycerophospholipid metabolism	2
cit00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00860	Porphyrin metabolism	6
nta00740	Riboflavin metabolism	2
nta01240	Biosynthesis of cofactors	2
nta00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00860	Porphyrin metabolism	6
nta00740	Riboflavin metabolism	2
nta01240	Biosynthesis of cofactors	2
nta00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00908	Zeatin biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00270	Cysteine and methionine metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

121223504

121209474

817103

103864682

106394614

106449988

102609753

100805091

102661561

100261242

7495748

11429975

102591109

107760942

107811787

4339688

100275322

109940239

123182126

123177238

123420348

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 121223504 (ghi-r.1 coexpression data)

Top 50 enrichment test to 121223504 (ghi-r.1 coexpression data)


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sot	nta	osa	zma	tae	hvu	bdi	sbi	cre	sly
Paralog	2	1	1	2	1	2	1	1	1	1	2	1	2	2	1	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 121223504 (ghi-r.1 coexpression data)

Top 50 enrichment test to 121223504 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**