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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   121232134   plant UBX domain-containing protein 4 
 ghi-r.1   107958296   plant UBX domain-containing protein 4 
 ghi-r.1   107942049   plant UBX domain-containing protein 4 
 ghi-r.1   107905903   plant UBX domain-containing protein 4 
 ath-u.5   PUX4   plant UBX domain containing protein 4 
 ath-u.5   PUX5   serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime gamma 
 ath-u.5   PUX3   UBA/UBX domain protein 
 bra-r.6   103859821   plant UBX domain-containing protein 3 
 bra-r.6   103861139   plant UBX domain-containing protein 5 
 bra-r.6   103858648   plant UBX domain-containing protein 4 
 bna-r.1   106366981   plant UBX domain-containing protein 3 
 bna-r.1   106360629   plant UBX domain-containing protein 5 
 bna-r.1   106366131   plant UBX domain-containing protein 4-like 
 cit-r.1   102613799   plant UBX domain-containing protein 4 
 cit-r.1   102619456   plant UBX domain-containing protein 4 
 gma-u.5   100820141   plant UBX domain-containing protein 4 
 gma-u.5   100806361   plant UBX domain-containing protein 4 
 gma-u.5   100792095   plant UBX domain-containing protein 4 
 vvi-u.5   100262315   plant UBX domain-containing protein 4 
 vvi-u.5   100243031   plant UBX domain-containing protein 4 
 ppo-u.5   7489882   plant UBX domain-containing protein 4 
 ppo-u.5   7484546   plant UBX domain-containing protein 4 
 ppo-u.5   112329128   plant UBX domain-containing protein 4 
 mtr-u.5   11430595   plant UBX domain-containing protein 4 
 mtr-u.5   25486233   plant UBX domain-containing protein 4 
 sly-u.5   101244442   plant UBX domain-containing protein 4-like 
 sly-u.5   101252989   plant UBX domain-containing protein 4 
 sly-u.5   101245776   plant UBX domain-containing protein 4 
 sot-r.1   102603772   plant UBX domain-containing protein 4-like 
 sot-r.1   102583198   plant UBX domain-containing protein 4 
 nta-r.1   107826558   plant UBX domain-containing protein 4 
 nta-r.1   107801130   plant UBX domain-containing protein 4 
 nta-r.1   107784723   plant UBX domain-containing protein 4 
 osa-u.5   4336083   plant UBX domain-containing protein 4 
 zma-u.5   100282371   uncharacterized LOC100282371 
 zma-u.5   100283360   UBA and UBX domain-containing protein 
 tae-r.2   123189462   plant UBX domain-containing protein 4 
 tae-r.2   123053567   plant UBX domain-containing protein 4 
 tae-r.2   123045694   plant UBX domain-containing protein 4 
 hvu-r.1   123426942   plant UBX domain-containing protein 4-like 
 sbi-r.1   8057491   plant UBX domain-containing protein 4 
 bdi-r.1   100827538   plant UBX domain-containing protein 4 
 cre-r.1   CHLRE_01g034451v5   uncharacterized protein 

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Top 50 coexpressed genes to 121232134 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 121232134 (ghi-r.1 coexpression data)

CoexMap"121232134"


ghiLOC121232134 | Entrez gene ID : 121232134    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 3 3 2 3 2 3 2 3 2 3 1 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi04141 [list] [network] Protein processing in endoplasmic reticulum (593 genes)
GO BP
GO:0031468 [list] [network] nuclear membrane reassembly  (7 genes)  IEA  
GO:0000045 [list] [network] autophagosome assembly  (67 genes)  IEA  
GO:0007030 [list] [network] Golgi organization  (96 genes)  IEA  
GO:0061025 [list] [network] membrane fusion  (150 genes)  IEA  
GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process  (406 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (2580 genes)  IEA  
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0043130 [list] [network] ubiquitin binding  (169 genes)  IEA  
Protein XP_040973537.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_040973537.1)
Subcellular
localization
TargetP
other 9  (predict for XP_040973537.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
121232134
ghi-r.1
for
107958296
ghi-r.1
for
107942049
ghi-r.1
for
107905903
ath-u.5
for
PUX4
ath-u.5
for
PUX5
ath-u.5
for
PUX3
bra-r.6
for
103859821
bra-r.6
for
103861139
bra-r.6
for
103858648
bna-r.1
for
106366981
bna-r.1
for
106360629
bna-r.1
for
106366131
cit-r.1
for
102613799
cit-r.1
for
102619456
gma-u.5
for
100820141
gma-u.5
for
100806361
gma-u.5
for
100792095
vvi-u.5
for
100262315
vvi-u.5
for
100243031
ppo-u.5
for
7489882
ppo-u.5
for
7484546
ppo-u.5
for
112329128
mtr-u.5
for
11430595
mtr-u.5
for
25486233
sly-u.5
for
101244442
sly-u.5
for
101252989
sly-u.5
for
101245776
sot-r.1
for
102603772
sot-r.1
for
102583198
nta-r.1
for
107826558
nta-r.1
for
107801130
nta-r.1
for
107784723
osa-u.5
for
4336083
zma-u.5
for
100282371
zma-u.5
for
100283360
tae-r.2
for
123189462
tae-r.2
for
123053567
tae-r.2
for
123045694
hvu-r.1
for
123426942
sbi-r.1
for
8057491
bdi-r.1
for
100827538
cre-r.1
for
CHLRE_01g034451v5


Ortholog ID: 2283
Species ghi ghi ghi ath ath ath bra bra bra bna bna bna cit cit gma gma gma vvi vvi ppo ppo mtr mtr sly sly sly sot sot nta nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC121232134 LOC107958296 LOC107963706 PUX4 PUX5 PUX3 LOC103859821 LOC103861139 LOC103839847 LOC106366981 LOC111214093 LOC106437643 LOC102613799 LOC102619456 LOC100820141 LOC100792095 LOC100789588 LOC100262315 LOC100243031 LOC7489882 LOC7484546 LOC11430595 LOC25486233 LOC101244442 LOC101252989 LOC101245776 LOC102603772 LOC102583198 LOC107826558 LOC107801130 LOC107784723 LOC4336083 LOC100282371 LOC100283360 LOC123189462 LOC123053567 LOC123045694 LOC123426942 LOC8057491 LOC100827538 CHLRE_01g034451v5
Function* plant UBX domain-containing protein 4 plant UBX domain-containing protein 4 plant UBX domain-containing protein 4 plant UBX domain containing protein 4 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime gamma UBA/UBX domain protein plant UBX domain-containing protein 3 plant UBX domain-containing protein 5 plant UBX domain-containing protein 4 plant UBX domain-containing protein 3 plant UBX domain-containing protein 4 plant UBX domain-containing protein 3 plant UBX domain-containing protein 4 plant UBX domain-containing protein 4 plant UBX domain-containing protein 4 plant UBX domain-containing protein 4 plant UBX domain-containing protein 4 plant UBX domain-containing protein 4 plant UBX domain-containing protein 4 plant UBX domain-containing protein 4 plant UBX domain-containing protein 4 plant UBX domain-containing protein 4 plant UBX domain-containing protein 4 plant UBX domain-containing protein 4-like plant UBX domain-containing protein 4 plant UBX domain-containing protein 4 plant UBX domain-containing protein 4-like plant UBX domain-containing protein 4 plant UBX domain-containing protein 4 plant UBX domain-containing protein 4 plant UBX domain-containing protein 4 plant UBX domain-containing protein 4 uncharacterized LOC100282371 UBA and UBX domain-containing protein plant UBX domain-containing protein 4 plant UBX domain-containing protein 4 plant UBX domain-containing protein 4 plant UBX domain-containing protein 4-like plant UBX domain-containing protein 4 plant UBX domain-containing protein 4 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 7
ghi04141 Protein processing in endoplasmic reticulum 4
ghi03420 Nucleotide excision repair 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 10
ath03040 Spliceosome 5
ath04144 Endocytosis 3
ath04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 3
ath04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 4
bna00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 6
gma04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 5
gma04141 Protein processing in endoplasmic reticulum 4
gma04146 Peroxisome 2
gma03040 Spliceosome 2
gma00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
gma04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 4
vvi04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 4
ppo03272 Virion - Hepatitis viruses 2
ppo04144 Endocytosis 2
ppo03015 mRNA surveillance pathway 2
ppo04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 10
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 5
mtr03083 Polycomb repressive complex 2
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 2
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 17
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 5
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 3
nta04712 Circadian rhythm - plant 2
nta03015 mRNA surveillance pathway 2
nta04382 Cornified envelope formation 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 4
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
zma03250 Viral life cycle - HIV-1 2
zma03050 Proteasome 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 7
zma04141 Protein processing in endoplasmic reticulum 4
zma03420 Nucleotide excision repair 3
zma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03022 Basal transcription factors 3
tae00020 Citrate cycle (TCA cycle) 3
tae00310 Lysine degradation 3
tae00380 Tryptophan metabolism 3
tae00785 Lipoic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04130 SNARE interactions in vesicular transport 3
tae04141 Protein processing in endoplasmic reticulum 3
tae04075 Plant hormone signal transduction 3
tae03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 4
hvu04141 Protein processing in endoplasmic reticulum 3
hvu04144 Endocytosis 3
hvu03083 Polycomb repressive complex 2
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 12
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 7
cre04141 Protein processing in endoplasmic reticulum 5
cre04120 Ubiquitin mediated proteolysis 4
cre03420 Nucleotide excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 121232134 107958296 107963706 825736 827210 828304 103859821 103861139 103839847 106366981 111214093 106437643 102613799 102619456 100820141 100792095 100789588 100262315 100243031 7489882 7484546 11430595 25486233 101244442 101252989 101245776 102603772 102583198 107826558 107801130 107784723 4336083 100282371 100283360 123189462 123053567 123045694 123426942 8057491 100827538 66052091
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