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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   cox1   cytochrome c oxidase subunit 1 
 ath-u.5   cox1   cytochrome c oxidase subunit 1 
 bna-r.1   cox1   cytochrome c oxidase subunit 1 
 cit-r.1   cox1   cytochrome c oxidase subunit 1 
 vvi-u.5   cox1   cytochrome c oxidase subunit 1 
 mtr-u.5   120577014   cytochrome c oxidase subunit 1 
 mtr-u.5   cox1   cytochrome c oxidase subunit 1 
 sly-u.5   cox1   cytochrome c oxidase subunit 1 
 nta-r.1   cox1   cytochrome oxidase subunit 1 
 osa-u.5   cox1   cytochrome c oxidase subunit1 
 zma-u.5   118475791   cytochrome c oxidase subunit 1 
 tae-r.2   cox1   cox1 
 sbi-r.1   cox1   cytochrome c oxidase subunit 1 

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Top 50 coexpressed genes to cox1 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to cox1 (ghi-r.1 coexpression data)

CoexMap"24679541"


ghicox1 | Entrez gene ID : 24679541    
Species ghi ath bna cit vvi mtr sly nta osa zma tae sbi sot bdi ppo cre hvu gma bra
Paralog 1 1 1 1 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00190 [list] [network] Oxidative phosphorylation (393 genes)
GO BP
GO CC
GO MF
Protein YP_009153951.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 6,  cyto_plas 4,  E.R. 2,  vacu 1,  golg 1  (predict for YP_009153951.1)
Subcellular
localization
TargetP
other 6,  mito 5  (predict for YP_009153951.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
cox1
ath-u.5
for
cox1
bna-r.1
for
cox1
cit-r.1
for
cox1
vvi-u.5
for
cox1
mtr-u.5
for
120577014
mtr-u.5
for
cox1
sly-u.5
for
cox1
nta-r.1
for
cox1
osa-u.5
for
cox1
zma-u.5
for
118475791
tae-r.2
for
cox1
sbi-r.1
for
cox1


Ortholog ID: 12714
Species ghi ath bna cit vvi mtr mtr sly nta osa zma tae sbi
Symbol cox1 cox1 cox1 cox1 cox1 LOC120577014 cox1 cox1 cox1 cox1 LOC118475791 cox1 cox1
Function* cytochrome c oxidase subunit 1 cytochrome c oxidase subunit 1 cytochrome c oxidase subunit 1 cytochrome c oxidase subunit 1 cytochrome c oxidase subunit 1 cytochrome c oxidase subunit 1 cytochrome c oxidase subunit 1 cytochrome c oxidase subunit 1 cytochrome oxidase subunit 1 cytochrome c oxidase subunit1 cytochrome c oxidase subunit 1 cox1 cytochrome c oxidase subunit 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 13
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 9
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 12
cit03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 11
vvi03010 Ribosome 4
vvi00020 Citrate cycle (TCA cycle) 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 16
mtr00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 14
mtr00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 10
sly03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 10
nta03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 8
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 15
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 12
sbi03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 24679541 36335686 4237882 36487046 7498537 120577014 26974342 34678313 3205311 6450122 118475791 34688768 4306042
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