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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106380805   protein CLT3, chloroplastic 
 bna-r.1   106383820   protein CLT3, chloroplastic 
 bna-r.1   106396595   protein CLT2, chloroplastic 
 bna-r.1   106425680   protein CLT1, chloroplastic 
 bra-r.6   103862112   protein CLT2, chloroplastic 
 bra-r.6   103850817   protein CLT3, chloroplastic 
 bra-r.6   103851269   protein CLT1, chloroplastic 
 ath-u.5   CLT2   CRT (chloroquine-resistance transporter)-like transporter 2 
 ath-u.5   CLT3   CRT (chloroquine-resistance transporter)-like transporter 3 
 ath-u.5   CLT1   CRT (chloroquine-resistance transporter)-like transporter 1 
 ghi-r.1   107905144   protein CLT2, chloroplastic 
 ghi-r.1   107957831   protein CLT2, chloroplastic 
 ghi-r.1   107945075   protein CLT1, chloroplastic 
 cit-r.1   102610256   protein CLT2, chloroplastic 
 cit-r.1   102628201   protein CLT1, chloroplastic 
 gma-u.5   100819888   protein CLT3, chloroplastic 
 gma-u.5   100802761   protein CLT2, chloroplastic 
 gma-u.5   100787260   protein CLT2-like 
 vvi-u.5   100267712   protein CLT2, chloroplastic 
 vvi-u.5   100265335   protein CLT1, chloroplastic 
 ppo-u.5   7475027   protein CLT1, chloroplastic 
 mtr-u.5   11431353   protein CLT2, chloroplastic 
 mtr-u.5   11431856   protein CLT1, chloroplastic 
 mtr-u.5   25479779   protein CLT3, chloroplastic 
 sly-u.5   101260721   protein CLT2, chloroplastic 
 sly-u.5   101254772   protein CLT1, chloroplastic 
 sot-r.1   102597866   protein CLT1, chloroplastic-like 
 sot-r.1   102597772   protein CLT2, chloroplastic 
 nta-r.1   107762960   protein CLT2, chloroplastic 
 nta-r.1   107793114   protein CLT3, chloroplastic 
 nta-r.1   107807676   protein CLT3, chloroplastic 
 osa-u.5   4325409   protein CLT1, chloroplastic 
 osa-u.5   4331958   protein CLT2, chloroplastic 
 osa-u.5   4352325   protein CLT2, chloroplastic 
 zma-u.5   103636274   protein CLT1, chloroplastic 
 zma-u.5   100277036   uncharacterized LOC100277036 
 zma-u.5   100277401   uncharacterized LOC100277401 
 tae-r.2   123063478   protein CLT1, chloroplastic 
 tae-r.2   123072554   protein CLT1, chloroplastic 
 tae-r.2   123080765   protein CLT1, chloroplastic 
 hvu-r.1   123445552   protein CLT1, chloroplastic-like 
 hvu-r.1   123449423   protein CLT2, chloroplastic-like 
 sbi-r.1   8054244   protein CLT2, chloroplastic 
 sbi-r.1   8077377   protein CLT1, chloroplastic 
 sbi-r.1   110437699   protein CLT2, chloroplastic-like 
 bdi-r.1   100824592   protein CLT1, chloroplastic 
 bdi-r.1   100838445   protein CLT2, chloroplastic 
 bdi-r.1   100821841   protein CLT2, chloroplastic 
 cre-r.1   CHLRE_01g030300v5   uncharacterized protein 

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Top 50 coexpressed genes to 106380805 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106380805 (bna-r.1 coexpression data)

CoexMap"106380805"


bnaLOC106380805 | Entrez gene ID : 106380805    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 3 3 2 3 2 1 3 2 2 3 3 3 3 2 3 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_013676087.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 4  (predict for XP_013676087.2)
Subcellular
localization
TargetP
chlo 9,  mito 5  (predict for XP_013676087.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106380805
bna-r.1
for
106383820
bna-r.1
for
106396595
bna-r.1
for
106425680
bra-r.6
for
103862112
bra-r.6
for
103850817
bra-r.6
for
103851269
ath-u.5
for
CLT2
ath-u.5
for
CLT3
ath-u.5
for
CLT1
ghi-r.1
for
107905144
ghi-r.1
for
107957831
ghi-r.1
for
107945075
cit-r.1
for
102610256
cit-r.1
for
102628201
gma-u.5
for
100819888
gma-u.5
for
100802761
gma-u.5
for
100787260
vvi-u.5
for
100267712
vvi-u.5
for
100265335
ppo-u.5
for
7475027
mtr-u.5
for
11431353
mtr-u.5
for
11431856
mtr-u.5
for
25479779
sly-u.5
for
101260721
sly-u.5
for
101254772
sot-r.1
for
102597866
sot-r.1
for
102597772
nta-r.1
for
107762960
nta-r.1
for
107793114
nta-r.1
for
107807676
osa-u.5
for
4325409
osa-u.5
for
4331958
osa-u.5
for
4352325
zma-u.5
for
103636274
zma-u.5
for
100277036
zma-u.5
for
100277401
tae-r.2
for
123063478
tae-r.2
for
123072554
tae-r.2
for
123080765
hvu-r.1
for
123445552
hvu-r.1
for
123449423
sbi-r.1
for
8054244
sbi-r.1
for
8077377
sbi-r.1
for
110437699
bdi-r.1
for
100824592
bdi-r.1
for
100838445
bdi-r.1
for
100821841
cre-r.1
for
CHLRE_01g030300v5


Ortholog ID: 2169
Species bna bna bna bra bra bra ath ath ath ghi ghi ghi cit cit gma gma gma vvi vvi ppo mtr mtr mtr sly sly sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu sbi sbi sbi bdi bdi bdi cre
Symbol LOC106380805 LOC106425680 LOC106442006 LOC103862112 LOC103850817 LOC103851269 CLT2 CLT3 CLT1 LOC107957831 LOC107945075 LOC107939443 LOC102610256 LOC102628201 LOC100819888 LOC100802761 LOC100787260 LOC100267712 LOC100265335 LOC7475027 LOC11431353 LOC11431856 LOC25479779 LOC101260721 LOC101254772 LOC102597866 LOC102597772 LOC107762960 LOC107807676 LOC107808626 LOC4325409 LOC4331958 LOC4352325 LOC103636274 LOC100277036 LOC100272467 LOC123072554 LOC123098384 LOC123119892 LOC123445552 LOC123449423 LOC8054244 LOC8077377 LOC110437699 LOC100824592 LOC100838445 LOC100821841 CHLRE_01g030300v5
Function* protein CLT3, chloroplastic protein CLT1, chloroplastic protein CLT2, chloroplastic protein CLT2, chloroplastic protein CLT3, chloroplastic protein CLT1, chloroplastic CRT (chloroquine-resistance transporter)-like transporter 2 CRT (chloroquine-resistance transporter)-like transporter 3 CRT (chloroquine-resistance transporter)-like transporter 1 protein CLT2, chloroplastic protein CLT1, chloroplastic protein CLT1, chloroplastic protein CLT2, chloroplastic protein CLT1, chloroplastic protein CLT3, chloroplastic protein CLT2, chloroplastic protein CLT2-like protein CLT2, chloroplastic protein CLT1, chloroplastic protein CLT1, chloroplastic protein CLT2, chloroplastic protein CLT1, chloroplastic protein CLT3, chloroplastic protein CLT2, chloroplastic protein CLT1, chloroplastic protein CLT1, chloroplastic-like protein CLT2, chloroplastic protein CLT2, chloroplastic protein CLT3, chloroplastic protein CLT2, chloroplastic protein CLT1, chloroplastic protein CLT2, chloroplastic protein CLT2, chloroplastic protein CLT1, chloroplastic uncharacterized LOC100277036 uncharacterized LOC100272467 protein CLT1, chloroplastic protein CLT2, chloroplastic protein CLT2, chloroplastic protein CLT1, chloroplastic-like protein CLT2, chloroplastic-like protein CLT2, chloroplastic protein CLT1, chloroplastic protein CLT2, chloroplastic-like protein CLT1, chloroplastic protein CLT2, chloroplastic protein CLT2, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 7
bna00543 Exopolysaccharide biosynthesis 7
bna00920 Sulfur metabolism 7
bna01200 Carbon metabolism 7
bna01230 Biosynthesis of amino acids 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 3
bra00730 Thiamine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 5
bra00270 Cysteine and methionine metabolism 4
bra00480 Glutathione metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 5
bra00260 Glycine, serine and threonine metabolism 4
bra00270 Cysteine and methionine metabolism 4
bra01200 Carbon metabolism 4
bra00230 Purine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 5
ath04075 Plant hormone signal transduction 5
ath00270 Cysteine and methionine metabolism 4
ath00480 Glutathione metabolism 2
ath01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 2
ghi00240 Pyrimidine metabolism 2
ghi01232 Nucleotide metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00052 Galactose metabolism 2
cit00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01240 Biosynthesis of cofactors 3
gma00740 Riboflavin metabolism 2
gma00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 3
gma00500 Starch and sucrose metabolism 2
gma01200 Carbon metabolism 2
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
vvi01230 Biosynthesis of amino acids 3
vvi00940 Phenylpropanoid biosynthesis 3
vvi00020 Citrate cycle (TCA cycle) 2
vvi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01230 Biosynthesis of amino acids 6
mtr00400 Phenylalanine, tyrosine and tryptophan biosynthesis 5
mtr00350 Tyrosine metabolism 3
mtr00360 Phenylalanine metabolism 2
mtr00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 3
sly00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
sly00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 6
sot01212 Fatty acid metabolism 3
sot00630 Glyoxylate and dicarboxylate metabolism 2
sot00760 Nicotinate and nicotinamide metabolism 2
sot00061 Fatty acid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00730 Thiamine metabolism 3
nta00230 Purine metabolism 2
nta01232 Nucleotide metabolism 2
nta01240 Biosynthesis of cofactors 2
nta00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
nta00730 Thiamine metabolism 2
nta01232 Nucleotide metabolism 2
nta01240 Biosynthesis of cofactors 2
nta00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 5
osa00760 Nicotinate and nicotinamide metabolism 3
osa00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 4
osa00860 Porphyrin metabolism 3
osa01230 Biosynthesis of amino acids 2
osa00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00020 Citrate cycle (TCA cycle) 5
zma01200 Carbon metabolism 5
zma01210 2-Oxocarboxylic acid metabolism 4
zma00785 Lipoic acid metabolism 3
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 5
tae01230 Biosynthesis of amino acids 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04620 Toll-like receptor signaling pathway 3
tae04075 Plant hormone signal transduction 3
tae00564 Glycerophospholipid metabolism 3
tae00592 alpha-Linolenic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00270 Cysteine and methionine metabolism 3
hvu00940 Phenylpropanoid biosynthesis 3
hvu00740 Riboflavin metabolism 2
hvu01240 Biosynthesis of cofactors 2
hvu00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
sbi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 3
bdi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 4
bdi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00510 N-Glycan biosynthesis 3
bdi04141 Protein processing in endoplasmic reticulum 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106380805 106425680 106442006 103862112 103850817 103851269 828548 831090 832058 107957831 107945075 107939443 102610256 102628201 100819888 100802761 100787260 100267712 100265335 7475027 11431353 11431856 25479779 101260721 101254772 102597866 102597772 107762960 107807676 107808626 4325409 4331958 4352325 103636274 100277036 100272467 123072554 123098384 123119892 123445552 123449423 8054244 8077377 110437699 100824592 100838445 100821841 5715364
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