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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106451235   ethylene-responsive transcription factor RAP2-13-like 
 bna-r.1   106441270   ethylene-responsive transcription factor ERF060-like 
 bna-r.1   106361368   ethylene-responsive transcription factor ERF060-like 
 bra-r.6   103832233   ethylene-responsive transcription factor RAP2-4 
 bra-r.6   103830541   ethylene-responsive transcription factor RAP2-4-like 
 ath-u.5   AT1G22190   Integrase-type DNA-binding superfamily protein 
 ath-u.5   AT2G22200   Integrase-type DNA-binding superfamily protein 
 ath-u.5   AT4G39780   Integrase-type DNA-binding superfamily protein 
 ghi-r.1   121208719   ethylene-responsive transcription factor ERF060 
 ghi-r.1   107898106   ethylene-responsive transcription factor ERF060-like 
 ghi-r.1   107905038   ethylene-responsive transcription factor RAP2-4 
 cit-r.1   102614278   ethylene-responsive transcription factor RAP2-4-like 
 cit-r.1   102614029   ethylene-responsive transcription factor RAP2-13 
 gma-u.5   100815162   ethylene-responsive transcription factor ERF060-like 
 gma-u.5   100802961   ethylene-responsive transcription factor RAP2-4 
 gma-u.5   100800478   ethylene-responsive transcription factor RAP2-4 
 vvi-u.5   100261438   ethylene-responsive transcription factor RAP2-4 
 vvi-u.5   100245515   ethylene-responsive transcription factor RAP2-4 
 ppo-u.5   7456918   ethylene-responsive transcription factor RAP2-4 
 ppo-u.5   7468904   ethylene-responsive transcription factor RAP2-13-like 
 ppo-u.5   7495144   ethylene-responsive transcription factor RAP2-4 
 mtr-u.5   11437084   ethylene-responsive transcription factor RAP2-4 
 mtr-u.5   25489428   ethylene-responsive transcription factor RAP2-4 
 mtr-u.5   25501933   ethylene-responsive transcription factor ERF060 
 sly-u.5   DREB3   dehydration-responsive element binding protein 3 
 sly-u.5   ERF-H10   ethylene response factor H.10 
 sly-u.5   ERF-H11   ethylene response factor H.11 
 sot-r.1   102602854   ethylene-responsive transcription factor RAP2-4 
 sot-r.1   102585333   ethylene-responsive transcription factor RAP2-13 
 sot-r.1   102591370   ethylene-responsive transcription factor RAP2-13 
 nta-r.1   107819325   ethylene-responsive transcription factor RAP2-4-like 
 nta-r.1   107759638   ethylene-responsive transcription factor RAP2-13-like 
 nta-r.1   107774257   ethylene-responsive transcription factor RAP2-4-like 
 osa-u.5   4346884   ethylene-responsive transcription factor RAP2-13 
 osa-u.5   4330752   ethylene-responsive transcription factor RAP2-4 
 osa-u.5   4340525   ethylene-responsive transcription factor RAP2-13 
 zma-u.5   100502435   putative AP2/EREBP transcription factor superfamily protein 
 zma-u.5   100280553   uncharacterized LOC100280553 
 zma-u.5   103632654   uncharacterized LOC103632654 
 tae-r.2   123138190   ethylene-responsive transcription factor RAP2-4 
 tae-r.2   123103606   ethylene-responsive transcription factor RAP2-13 
 tae-r.2   123111823   ethylene-responsive transcription factor RAP2-13 
 hvu-r.1   123402980   ethylene-responsive transcription factor RAP2-4-like 
 hvu-r.1   123412187   ethylene-responsive transcription factor RAP2-13-like 
 hvu-r.1   123395344   ethylene-responsive transcription factor RAP2-13 
 sbi-r.1   8066410   ethylene-responsive transcription factor ERF060 
 sbi-r.1   8065368   ethylene-responsive transcription factor RAP2-4 
 sbi-r.1   8080057   ethylene-responsive transcription factor RAP2-13 
 bdi-r.1   100839894   ethylene-responsive transcription factor RAP2-4 
 bdi-r.1   100838838   ethylene-responsive transcription factor RAP2-13 
 bdi-r.1   100836054   ethylene-responsive transcription factor RAP2-13 

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Top 50 coexpressed genes to 106451235 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106451235 (bna-r.1 coexpression data)

CoexMap"106451235"


bnaLOC106451235 | Entrez gene ID : 106451235    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 2 3 3 2 3 2 3 3 3 3 3 3 3 3 3 3 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (5322 genes)  IEA  
GO CC
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (3791 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (6522 genes)  IEA  
Protein XP_013748584.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  nucl_plas 4,  chlo 2,  mito 1,  plas 1,  extr 1  (predict for XP_013748584.1)
Subcellular
localization
TargetP
other 9  (predict for XP_013748584.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106451235
bna-r.1
for
106441270
bna-r.1
for
106361368
bra-r.6
for
103832233
bra-r.6
for
103830541
ath-u.5
for
AT1G22190
ath-u.5
for
AT2G22200
ath-u.5
for
AT4G39780
ghi-r.1
for
121208719
ghi-r.1
for
107898106
ghi-r.1
for
107905038
cit-r.1
for
102614278
cit-r.1
for
102614029
gma-u.5
for
100815162
gma-u.5
for
100802961
gma-u.5
for
100800478
vvi-u.5
for
100261438
vvi-u.5
for
100245515
ppo-u.5
for
7456918
ppo-u.5
for
7468904
ppo-u.5
for
7495144
mtr-u.5
for
11437084
mtr-u.5
for
25489428
mtr-u.5
for
25501933
sly-u.5
for
DREB3
sly-u.5
for
ERF-H10
sly-u.5
for
ERF-H11
sot-r.1
for
102602854
sot-r.1
for
102585333
sot-r.1
for
102591370
nta-r.1
for
107819325
nta-r.1
for
107759638
nta-r.1
for
107774257
osa-u.5
for
4346884
osa-u.5
for
4330752
osa-u.5
for
4340525
zma-u.5
for
100502435
zma-u.5
for
100280553
zma-u.5
for
103632654
tae-r.2
for
123138190
tae-r.2
for
123103606
tae-r.2
for
123111823
hvu-r.1
for
123402980
hvu-r.1
for
123412187
hvu-r.1
for
123395344
sbi-r.1
for
8066410
sbi-r.1
for
8065368
sbi-r.1
for
8080057
bdi-r.1
for
100839894
bdi-r.1
for
100838838
bdi-r.1
for
100836054


Ortholog ID: 914
Species bna bna bra bra bra ath ath ath ghi ghi ghi cit cit gma gma gma vvi vvi ppo ppo ppo mtr mtr mtr sly sly sly sot sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi bdi
Symbol LOC106430468 LOC106402048 LOC103830541 LOC103864333 LOC103853108 AT1G22190 AT2G22200 RAP2.4 LOC107905038 LOC107950470 LOC107962440 LOC102614278 LOC102614029 LOC100815162 LOC106796800 DREB3 LOC100261438 LOC100245515 LOC7456918 LOC7468904 LOC7471518 LOC11437084 LOC25489428 LOC25501933 DREB3 ERF-H10 ERF-H11 LOC102602854 LOC102585333 LOC102591370 LOC107819325 LOC107759638 LOC107774257 LOC4346884 LOC4330752 LOC4340525 LOC103632654 LOC103637851 LOC542569 LOC123128343 LOC123159838 LOC123166284 LOC123402980 LOC123412187 LOC123395344 LOC8066410 LOC8065368 LOC8073540 LOC100839894 LOC100838838 LOC100836054
Function* ethylene-responsive transcription factor ERF060-like ethylene-responsive transcription factor RAP2-13-like ethylene-responsive transcription factor RAP2-4-like ethylene-responsive transcription factor ERF056 ethylene-responsive transcription factor RAP2-4 Integrase-type DNA-binding superfamily protein Integrase-type DNA-binding superfamily protein uncharacterized protein ethylene-responsive transcription factor RAP2-4 ethylene-responsive transcription factor ERF060 ethylene-responsive transcription factor RAP2-13 ethylene-responsive transcription factor RAP2-4-like ethylene-responsive transcription factor RAP2-13 ethylene-responsive transcription factor ERF060-like ethylene-responsive transcription factor ERF060 dehydration responsive element-binding protein 3 ethylene-responsive transcription factor RAP2-4 ethylene-responsive transcription factor RAP2-4 ethylene-responsive transcription factor RAP2-4 ethylene-responsive transcription factor RAP2-13-like ethylene-responsive transcription factor RAP2-4 ethylene-responsive transcription factor RAP2-4 ethylene-responsive transcription factor RAP2-4 ethylene-responsive transcription factor ERF060 dehydration-responsive element binding protein 3 ethylene response factor H.10 ethylene response factor H.11 ethylene-responsive transcription factor RAP2-4 ethylene-responsive transcription factor RAP2-13 ethylene-responsive transcription factor RAP2-13 ethylene-responsive transcription factor RAP2-4-like ethylene-responsive transcription factor RAP2-13-like ethylene-responsive transcription factor RAP2-4-like ethylene-responsive transcription factor RAP2-13 ethylene-responsive transcription factor RAP2-4 ethylene-responsive transcription factor RAP2-13 uncharacterized LOC103632654 ethylene-responsive transcription factor RAP2-13 uncharacterized LOC542569 ethylene-responsive transcription factor RAP2-4 ethylene-responsive transcription factor RAP2-13 ethylene-responsive transcription factor RAP2-13 ethylene-responsive transcription factor RAP2-4-like ethylene-responsive transcription factor RAP2-13-like ethylene-responsive transcription factor RAP2-13 ethylene-responsive transcription factor ERF060 ethylene-responsive transcription factor RAP2-4 ethylene-responsive transcription factor ERF060 ethylene-responsive transcription factor RAP2-4 ethylene-responsive transcription factor RAP2-13 ethylene-responsive transcription factor RAP2-13
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00220 Arginine biosynthesis 2
bna00250 Alanine, aspartate and glutamate metabolism 2
bna00630 Glyoxylate and dicarboxylate metabolism 2
bna00910 Nitrogen metabolism 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
ppo04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 3
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00030 Pentose phosphate pathway 2
sot00710 Carbon fixation by Calvin cycle 2
sot01200 Carbon metabolism 2
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00053 Ascorbate and aldarate metabolism 4
nta00520 Amino sugar and nucleotide sugar metabolism 4
nta01240 Biosynthesis of cofactors 4
nta01250 Biosynthesis of nucleotide sugars 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 4
zma04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 4
hvu04016 MAPK signaling pathway - plant 3
hvu04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106430468 106402048 103830541 103864333 103853108 838824 816754 844143 107905038 107950470 107962440 102614278 102614029 100815162 106796800 732559 100261438 100245515 7456918 7468904 7471518 11437084 25489428 25501933 543714 101264209 101250096 102602854 102585333 102591370 107819325 107759638 107774257 4346884 4330752 4340525 103632654 103637851 542569 123128343 123159838 123166284 123402980 123412187 123395344 8066410 8065368 8073540 100839894 100838838 100836054
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