ATTED-II : GeneCoexpression result

Species	Gene	Description
bna-r.1	125575092	uncharacterized LOC125575092
bna-r.1	106437763	uncharacterized LOC106437763
bra-r.6	103857432	uncharacterized LOC103857432
ath-u.5	AT2G32640	Lycopene beta/epsilon cyclase protein
ghi-r.1	107955068	uncharacterized LOC107955068
ghi-r.1	107955655	uncharacterized LOC107955655
cit-r.1	102620780	uncharacterized LOC102620780
gma-u.5	100784275	uncharacterized LOC100784275
vvi-u.5	100241486	uncharacterized LOC100241486
ppo-u.5	7468518	uncharacterized LOC7468518
mtr-u.5	25502625	uncharacterized LOC25502625
sly-u.5	101254642	uncharacterized LOC101254642
sot-r.1	102595883	uncharacterized LOC102595883
nta-r.1	107775021	uncharacterized LOC107775021
nta-r.1	107773393	uncharacterized LOC107773393
osa-u.5	4345597	uncharacterized LOC4345597
zma-u.5	100502482	uncharacterized LOC100502482
tae-r.2	123072524	uncharacterized LOC123072524
tae-r.2	123080743	uncharacterized LOC123080743
hvu-r.1	123442189	uncharacterized LOC123442189
sbi-r.1	8075372	uncharacterized LOC8075372
bdi-r.1	100825935	uncharacterized LOC100825935
cre-r.1	CHLRE_06g264250v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_013734176.1 [sequence] [blastp]
XP_048630853.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9	(predict for XP_013734176.1)
chlo 9, cyto 1, mito 1	(predict for XP_048630853.1)

Subcellular
localization
TargetP

chlo 8, mito 7	(predict for XP_013734176.1)
chlo 8, mito 7	(predict for XP_048630853.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 125575092	bna-r.1 for 106437763	bra-r.6 for 103857432	ath-u.5 for AT2G32640	ghi-r.1 for 107955068	ghi-r.1 for 107955655	cit-r.1 for 102620780	gma-u.5 for 100784275	vvi-u.5 for 100241486	ppo-u.5 for 7468518	mtr-u.5 for 25502625	sly-u.5 for 101254642	sot-r.1 for 102595883	nta-r.1 for 107775021	nta-r.1 for 107773393	osa-u.5 for 4345597	zma-u.5 for 100502482	tae-r.2 for 123072524	tae-r.2 for 123080743	hvu-r.1 for 123442189	sbi-r.1 for 8075372	bdi-r.1 for 100825935	cre-r.1 for CHLRE_06g264250v5

Ortholog

Ortholog ID: 11259

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC125575092

uncharacterized LOC106437763

uncharacterized LOC103857432

Lycopene beta/epsilon cyclase protein

uncharacterized LOC107955068

uncharacterized LOC107955655

uncharacterized LOC102620780

uncharacterized LOC100784275

uncharacterized LOC100241486

uncharacterized LOC7468518

uncharacterized LOC25502625

uncharacterized LOC101254642

uncharacterized LOC102595883

uncharacterized LOC107775021

uncharacterized LOC107773393

uncharacterized LOC4345597

uncharacterized LOC100502482

uncharacterized LOC123072524

uncharacterized LOC123080743

uncharacterized LOC123442189

uncharacterized LOC8075372

uncharacterized LOC100825935

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00920	Sulfur metabolism	2
bna00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00920	Sulfur metabolism	2
bna00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00900	Terpenoid backbone biosynthesis	3
ghi00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00900	Terpenoid backbone biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00195	Photosynthesis	4
gma00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01200	Carbon metabolism	8
sly00710	Carbon fixation by Calvin cycle	4
sly00630	Glyoxylate and dicarboxylate metabolism	4
sly00010	Glycolysis / Gluconeogenesis	3
sly00030	Pentose phosphate pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00562	Inositol phosphate metabolism	2
nta04070	Phosphatidylinositol signaling system	2
nta04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03060	Protein export	2
osa00630	Glyoxylate and dicarboxylate metabolism	2
osa01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00230	Purine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00230	Purine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00630	Glyoxylate and dicarboxylate metabolism	3
bdi01200	Carbon metabolism	3
bdi00260	Glycine, serine and threonine metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

125575092

106437763

103857432

817824

107955068

107955655

102620780

100784275

100241486

7468518

25502625

101254642

102595883

107775021

107773393

4345597

100502482

123072524

123080743

123442189

8075372

100825935

5721978

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 125575092 (bna-r.1 coexpression data)

Top 50 enrichment test to 125575092 (bna-r.1 coexpression data)


Species	bna	bra	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	2	1	1	2	1	1	1	1	1	1	1	2	1	1	2	1	1	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 125575092 (bna-r.1 coexpression data)

Top 50 enrichment test to 125575092 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**