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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   125578644   pentatricopeptide repeat-containing protein At1g06143-like 
 bna-r.1   106419844   pentatricopeptide repeat-containing protein At1g06143-like 
 bra-r.6   103843567   pentatricopeptide repeat-containing protein At1g06143 
 ath-u.5   AT1G06143   basic helix loop helix DNA-binding superfamily protein 
 ghi-r.1   107915076   pentatricopeptide repeat-containing protein At1g06143 
 ghi-r.1   121204953   pentatricopeptide repeat-containing protein At1g06143 
 vvi-u.5   100264065   pentatricopeptide repeat-containing protein At1g06143 
 mtr-u.5   25498248   pentatricopeptide repeat-containing protein At1g06143 
 sly-u.5   101263971   pentatricopeptide repeat-containing protein At1g06143 

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Top 50 coexpressed genes to 125578644 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 125578644 (bna-r.1 coexpression data)

CoexMap""


bnaLOC125578644 | Entrez gene ID : 125578644    
Species bna bra ath ghi vvi mtr sly tae nta bdi cit sot hvu zma osa sbi cre ppo gma
Paralog 2 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
Function pentatricopeptide repeat-containing protein At1g06143-like
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (870 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (3852 genes)  IEA  
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_048597902.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  chlo_mito 5  (predict for XP_048597902.1)
Subcellular
localization
TargetP
mito 3,  other 3  (predict for XP_048597902.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
125578644
bna-r.1
for
106419844
bra-r.6
for
103843567
ath-u.5
for
AT1G06143
ghi-r.1
for
107915076
ghi-r.1
for
121204953
vvi-u.5
for
100264065
mtr-u.5
for
25498248
sly-u.5
for
101263971

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Ortholog ID: 13238
Species bna bna bra ath ghi ghi vvi mtr sly
Symbol LOC125578644 LOC106419844 LOC103843567 AT1G06143 LOC107915076 LOC121204953 LOC100264065 LOC25498248 LOC101263971
Function* pentatricopeptide repeat-containing protein At1g06143-like pentatricopeptide repeat-containing protein At1g06143-like pentatricopeptide repeat-containing protein At1g06143 basic helix loop helix DNA-binding superfamily protein pentatricopeptide repeat-containing protein At1g06143 pentatricopeptide repeat-containing protein At1g06143 pentatricopeptide repeat-containing protein At1g06143 pentatricopeptide repeat-containing protein At1g06143 pentatricopeptide repeat-containing protein At1g06143
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 125578644 106419844 103843567 28716441 107915076 121204953 100264065 25498248 101263971
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