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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   125603412   protein REVEILLE 2-like 
 bna-r.1   106386300   protein REVEILLE 1 
 bna-r.1   111211014   protein REVEILLE 1 
 bna-r.1   106346902   protein REVEILLE 7-like 
 bra-r.6   103856239   protein REVEILLE 1 
 bra-r.6   103846255   protein REVEILLE 1 
 bra-r.6   103851098   protein REVEILLE 1 
 ath-u.5   RVE1   Homeodomain-like superfamily protein 
 ath-u.5   EPR1   Homeodomain-like superfamily protein 
 ath-u.5   AT3G10113   Homeodomain-like superfamily protein 
 ghi-r.1   107953319   protein REVEILLE 7 
 ghi-r.1   107926642   protein REVEILLE 2 
 ghi-r.1   107904753   protein REVEILLE 7 
 cit-r.1   102630458   protein REVEILLE 1 
 cit-r.1   102614255   protein REVEILLE 7-like 
 gma-u.5   100785040   protein REVEILLE 1 
 gma-u.5   100101861   protein REVEILLE 7-like 
 gma-u.5   MYB173   MYB transcription factor MYB173 
 vvi-u.5   100263252   protein REVEILLE 1 
 ppo-u.5   7485192   protein REVEILLE 7 
 ppo-u.5   18105607   protein REVEILLE 7 
 ppo-u.5   7494524   protein REVEILLE 1 
 mtr-u.5   11427268   protein REVEILLE 1 
 mtr-u.5   25497345   protein REVEILLE 7 
 sly-u.5   101261079   protein REVEILLE 1 
 sly-u.5   101255972   protein REVEILLE 7 
 sot-r.1   102602066   protein REVEILLE 1 
 nta-r.1   107801057   protein REVEILLE 1-like 
 nta-r.1   107812899   uncharacterized LOC107812899 
 nta-r.1   107796078   uncharacterized LOC107796078 
 osa-u.5   4342135   protein REVEILLE 1 
 osa-u.5   4336779   uncharacterized LOC4336779 
 osa-u.5   4330349   protein REVEILLE 1 
 zma-u.5   100279070   uncharacterized LOC100279070 
 zma-u.5   100276850   uncharacterized LOC100276850 
 zma-u.5   100273616   uncharacterized LOC100273616 
 tae-r.2   123054556   protein REVEILLE 7 
 tae-r.2   123046701   protein REVEILLE 7 
 tae-r.2   123159960   protein LHY 
 hvu-r.1   123401551   protein REVEILLE 1-like 
 hvu-r.1   123407640   protein LHY-like 
 hvu-r.1   123427840   protein REVEILLE 1-like 
 sbi-r.1   8060442   uncharacterized LOC8060442 
 sbi-r.1   8073204   uncharacterized LOC8073204 
 sbi-r.1   110431210   uncharacterized LOC110431210 
 bdi-r.1   100829508   myb-like protein H 
 bdi-r.1   100837761   protein REVEILLE 2 
 bdi-r.1   100842816   protein REVEILLE 7-like 
 cre-r.1   CHLRE_06g275350v5   uncharacterized protein 

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Top 50 coexpressed genes to 125603412 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 125603412 (bna-r.1 coexpression data)

CoexMap"125603412"


bnaLOC125603412 | Entrez gene ID : 125603412    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 3 3 2 3 1 3 2 2 1 3 3 3 3 3 3 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003677 [list] [network] DNA binding  (6522 genes)  IEA  
Protein XP_048630398.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_048630398.1)
Subcellular
localization
TargetP
other 8  (predict for XP_048630398.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
125603412
bna-r.1
for
106386300
bna-r.1
for
111211014
bna-r.1
for
106346902
bra-r.6
for
103856239
bra-r.6
for
103846255
bra-r.6
for
103851098
ath-u.5
for
RVE1
ath-u.5
for
EPR1
ath-u.5
for
AT3G10113
ghi-r.1
for
107953319
ghi-r.1
for
107926642
ghi-r.1
for
107904753
cit-r.1
for
102630458
cit-r.1
for
102614255
gma-u.5
for
100785040
gma-u.5
for
100101861
gma-u.5
for
MYB173
vvi-u.5
for
100263252
ppo-u.5
for
7485192
ppo-u.5
for
18105607
ppo-u.5
for
7494524
mtr-u.5
for
11427268
mtr-u.5
for
25497345
sly-u.5
for
101261079
sly-u.5
for
101255972
sot-r.1
for
102602066
nta-r.1
for
107801057
nta-r.1
for
107812899
nta-r.1
for
107796078
osa-u.5
for
4342135
osa-u.5
for
4336779
osa-u.5
for
4330349
zma-u.5
for
100279070
zma-u.5
for
100276850
zma-u.5
for
100273616
tae-r.2
for
123054556
tae-r.2
for
123046701
tae-r.2
for
123159960
hvu-r.1
for
123401551
hvu-r.1
for
123407640
hvu-r.1
for
123427840
sbi-r.1
for
8060442
sbi-r.1
for
8073204
sbi-r.1
for
110431210
bdi-r.1
for
100829508
bdi-r.1
for
100837761
bdi-r.1
for
100842816
cre-r.1
for
CHLRE_06g275350v5


Ortholog ID: 1576
Species bna bna bna bra bra bra ath ath ath ghi ghi ghi cit cit gma gma gma vvi ppo ppo ppo mtr mtr sly sly sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi bdi cre
Symbol LOC111211014 LOC111202817 LOC106387719 LOC103846255 LOC103851098 EPR1 RVE1 EPR1 RVE2 LOC107953319 LOC107926642 LOC121211262 LOC102630458 LOC102614255 MYB173 MYB177 LOC778089 LOC100263252 LOC7485192 LOC18105607 LOC18106485 LOC11427268 LOC25497345 LOC101261079 LOC101255972 LOC102602066 LOC107812899 LOC107796078 LOC107784585 LOC4342135 LOC4336779 LOC4330349 LOC100279070 LOC100276850 LOC100273483 LOC123046701 LOC100873110 LOC123190414 LOC123401551 LOC123407640 LOC123427840 LOC8060442 LOC8073204 LOC110431210 LOC100829508 LOC100837761 LOC100842816 CHLRE_06g275350v5
Function* protein REVEILLE 1 protein REVEILLE 1-like protein REVEILLE 1 protein REVEILLE 1 protein REVEILLE 1 protein REVEILLE 7 Homeodomain-like superfamily protein Homeodomain-like superfamily protein Homeodomain-like superfamily protein protein REVEILLE 7 protein REVEILLE 2 protein REVEILLE 7 protein REVEILLE 1 protein REVEILLE 7-like MYB transcription factor MYB173 MYB transcription factor MYB177 protein REVEILLE 7 protein REVEILLE 1 protein REVEILLE 7 protein REVEILLE 7 protein REVEILLE 1 protein REVEILLE 1 protein REVEILLE 7 protein REVEILLE 1 protein REVEILLE 7 protein REVEILLE 1 uncharacterized LOC107812899 uncharacterized LOC107796078 protein REVEILLE 1 protein REVEILLE 1 uncharacterized LOC4336779 protein REVEILLE 1 uncharacterized LOC100279070 uncharacterized LOC100276850 uncharacterized LOC100273483 protein REVEILLE 7 protein REVEILLE 1 protein REVEILLE 2 protein REVEILLE 1-like protein LHY-like protein REVEILLE 1-like uncharacterized LOC8060442 uncharacterized LOC8073204 uncharacterized LOC110431210 myb-like protein H protein REVEILLE 2 protein REVEILLE 7-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 3
mtr00270 Cysteine and methionine metabolism 2
mtr00330 Arginine and proline metabolism 2
mtr04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00230 Purine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 111211014 111202817 106387719 103846255 103851098 103872597 831595 838413 833700 107953319 107926642 121211262 102630458 102614255 778058 778060 778089 100263252 7485192 18105607 18106485 11427268 25497345 101261079 101255972 102602066 107812899 107796078 107784585 4342135 4336779 4330349 100279070 100276850 100273483 123046701 100873110 123190414 123401551 123407640 123427840 8060442 8073204 110431210 100829508 100837761 100842816 5721757
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