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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.lig   AT2G21860   violaxanthin de-epoxidase-like protein 
 ath-u.5   AT2G21860   violaxanthin de-epoxidase-like protein 
 ath-r.7   AT2G21860   violaxanthin de-epoxidase-like protein 
 ath-m.9   AT2G21860   violaxanthin de-epoxidase-like protein 
 ath-e.2   AT2G21860   violaxanthin de-epoxidase-like protein 
 ath-m.4.bio   AT2G21860   violaxanthin de-epoxidase-like protein 
 ath-m.4.hor   AT2G21860   violaxanthin de-epoxidase-like protein 
 ath-m.4.str   AT2G21860   violaxanthin de-epoxidase-like protein 
 ath-m.4.tis   AT2G21860   violaxanthin de-epoxidase-like protein 
 bra-r.6   103864298   uncharacterized LOC103864298 
 bna-r.1   BNACNNG13890D   uncharacterized BNACNNG13890D 
 bna-r.1   106420766   uncharacterized LOC106420766 
 ghi-r.1   107950602   uncharacterized LOC107950602 
 ghi-r.1   121210213   violaxanthin de-epoxidase, chloroplastic 
 cit-r.1   102626038   uncharacterized LOC102626038 
 gma-u.5   100812383   uncharacterized LOC100812383 
 vvi-u.5   100259321   uncharacterized LOC100259321 
 ppo-u.5   7477136   violaxanthin de-epoxidase, chloroplastic 
 mtr-u.5   11427448   violaxanthin de-epoxidase, chloroplastic 
 sly-u.5   101260129   uncharacterized LOC101260129 
 sot-r.1   102606421   uncharacterized LOC102606421 
 sot-r.1   102595436   uncharacterized LOC102595436 
 nta-r.1   107800328   violaxanthin de-epoxidase, chloroplastic-like 
 nta-r.1   107788911   violaxanthin de-epoxidase, chloroplastic-like 
 osa-u.5   4325583   uncharacterized LOC4325583 
 zma-u.5   100381876   violaxanthin de-epoxidase3 
 tae-r.2   123070342   violaxanthin de-epoxidase, chloroplastic 
 tae-r.2   123061692   violaxanthin de-epoxidase, chloroplastic 
 tae-r.2   123078792   violaxanthin de-epoxidase, chloroplastic 
 hvu-r.1   123444277   violaxanthin de-epoxidase, chloroplastic 
 sbi-r.1   8069798   violaxanthin de-epoxidase, chloroplastic 
 bdi-r.1   100823768   uncharacterized LOC100823768 
 cre-r.1   CHLRE_09g388060v5   uncharacterized protein 

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Top 50 coexpressed genes to AT2G21860 (ath-m.4.lig coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT2G21860 (ath-m.4.lig coexpression data)

CoexMap"816722"


athAT2G21860 | Entrez gene ID : 816722      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 1 1 1 1 1 2 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010028 [list] [network] xanthophyll cycle  (3 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
GO:0046422 [list] [network] violaxanthin de-epoxidase activity  (2 genes)  IEA  
GO:0016851 [list] [network] magnesium chelatase activity  (5 genes)  IEA  
Protein NP_565520.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for NP_565520.1)
Subcellular
localization
TargetP
chlo 6  (predict for NP_565520.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.lig
for
AT2G21860
ath-u.5
for
AT2G21860
ath-r.7
for
AT2G21860
ath-m.9
for
AT2G21860
ath-e.2
for
AT2G21860
ath-m.4.bio
for
AT2G21860
ath-m.4.hor
for
AT2G21860
ath-m.4.str
for
AT2G21860
ath-m.4.tis
for
AT2G21860
bra-r.6
for
103864298
bna-r.1
for
BNACNNG13890D
bna-r.1
for
106420766
ghi-r.1
for
107950602
ghi-r.1
for
121210213
cit-r.1
for
102626038
gma-u.5
for
100812383
vvi-u.5
for
100259321
ppo-u.5
for
7477136
mtr-u.5
for
11427448
sly-u.5
for
101260129
sot-r.1
for
102606421
sot-r.1
for
102595436
nta-r.1
for
107800328
nta-r.1
for
107788911
osa-u.5
for
4325583
zma-u.5
for
100381876
tae-r.2
for
123070342
tae-r.2
for
123061692
tae-r.2
for
123078792
hvu-r.1
for
123444277
sbi-r.1
for
8069798
bdi-r.1
for
100823768
cre-r.1
for
CHLRE_09g388060v5


Ortholog ID: 9992
Species ath bra bna bna ghi ghi cit gma vvi ppo mtr sly sot sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol AT2G21860 LOC103864298 BNACNNG13890D LOC106420766 LOC107950602 LOC121210213 LOC102626038 LOC100812383 LOC100259321 LOC7477136 LOC11427448 LOC101260129 LOC102606421 LOC102595436 LOC107800328 LOC107788911 LOC4325583 LOC100381876 LOC123070342 LOC123061692 LOC123078792 LOC123444277 LOC8069798 LOC100823768 CHLRE_09g388060v5
Function* violaxanthin de-epoxidase-like protein uncharacterized LOC103864298 uncharacterized BNACNNG13890D uncharacterized LOC106420766 uncharacterized LOC107950602 violaxanthin de-epoxidase, chloroplastic uncharacterized LOC102626038 uncharacterized LOC100812383 uncharacterized LOC100259321 violaxanthin de-epoxidase, chloroplastic violaxanthin de-epoxidase, chloroplastic uncharacterized LOC101260129 uncharacterized LOC102606421 uncharacterized LOC102595436 violaxanthin de-epoxidase, chloroplastic-like violaxanthin de-epoxidase, chloroplastic-like uncharacterized LOC4325583 violaxanthin de-epoxidase3 violaxanthin de-epoxidase, chloroplastic violaxanthin de-epoxidase, chloroplastic violaxanthin de-epoxidase, chloroplastic violaxanthin de-epoxidase, chloroplastic violaxanthin de-epoxidase, chloroplastic uncharacterized LOC100823768 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00230 Purine metabolism 2
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 5
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 5
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta04141 Protein processing in endoplasmic reticulum 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta04141 Protein processing in endoplasmic reticulum 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
osa04141 Protein processing in endoplasmic reticulum 3
osa04144 Endocytosis 2
osa04626 Plant-pathogen interaction 2
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 6
tae00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00909 Sesquiterpenoid and triterpenoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 816722 103864298 106376934 106420766 107950602 121210213 102626038 100812383 100259321 7477136 11427448 101260129 102606421 102595436 107800328 107788911 4325583 100381876 123070342 123061692 123078792 123444277 8069798 100823768 5720579
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