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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.lig   AT2G34610   cotton fiber protein 
 ath-u.5   AT2G34610   cotton fiber protein 
 ath-r.7   AT2G34610   cotton fiber protein 
 ath-m.9   AT2G34610   cotton fiber protein 
 ath-e.2   AT2G34610   cotton fiber protein 
 ath-m.4.bio   AT2G34610   cotton fiber protein 
 ath-m.4.hor   AT2G34610   cotton fiber protein 
 ath-m.4.str   AT2G34610   cotton fiber protein 
 ath-m.4.tis   AT2G34610   cotton fiber protein 
 ath-u.5   AT1G30190   cotton fiber protein 
 bra-r.6   103865349   uncharacterized LOC103865349 
 bra-r.6   103828906   uncharacterized LOC103828906 
 ghi-r.1   121208519   uncharacterized LOC121208519 
 ghi-r.1   107959963   uncharacterized LOC107959963 
 ghi-r.1   107914921   uncharacterized LOC107914921 
 cit-r.1   102615761   uncharacterized LOC102615761 
 mtr-u.5   11446855   uncharacterized LOC11446855 
 nta-r.1   107805074   uncharacterized LOC107805074 
 osa-u.5   4352802   uncharacterized LOC4352802 
 zma-u.5   103640606   uncharacterized LOC103640606 
 tae-r.2   123119288   uncharacterized LOC123119288 
 tae-r.2   123102108   uncharacterized LOC123102108 
 tae-r.2   123115532   uncharacterized LOC123115532 
 hvu-r.1   123396011   uncharacterized LOC123396011 
 sbi-r.1   8071477   uncharacterized LOC8071477 
 bdi-r.1   100836094   uncharacterized LOC100836094 

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Top 50 coexpressed genes to AT2G34610 (ath-m.4.lig coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT2G34610 (ath-m.4.lig coexpression data)

CoexMap"818026"


athAT2G34610 | Entrez gene ID : 818026      
Species ath bra ghi cit mtr nta osa zma tae hvu sbi bdi cre vvi ppo bna gma sly sot
Paralog 10 2 3 1 1 1 1 1 3 1 1 1 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_850233.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 5,  nucl 3,  golg_plas 3  (predict for NP_850233.1)
Subcellular
localization
TargetP
other 9  (predict for NP_850233.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.lig
for
AT2G34610
ath-u.5
for
AT2G34610
ath-r.7
for
AT2G34610
ath-m.9
for
AT2G34610
ath-e.2
for
AT2G34610
ath-m.4.bio
for
AT2G34610
ath-m.4.hor
for
AT2G34610
ath-m.4.str
for
AT2G34610
ath-m.4.tis
for
AT2G34610
ath-u.5
for
AT1G30190
bra-r.6
for
103865349
bra-r.6
for
103828906
ghi-r.1
for
121208519
ghi-r.1
for
107959963
ghi-r.1
for
107914921
cit-r.1
for
102615761
mtr-u.5
for
11446855
nta-r.1
for
107805074
osa-u.5
for
4352802
zma-u.5
for
103640606
tae-r.2
for
123119288
tae-r.2
for
123102108
tae-r.2
for
123115532
hvu-r.1
for
123396011
sbi-r.1
for
8071477
bdi-r.1
for
100836094


Ortholog ID: 5082
Species ath ath bra bra ghi ghi ghi cit mtr nta osa zma tae tae tae hvu sbi bdi
Symbol AT2G34610 AT1G30190 LOC103865349 LOC103828906 LOC107959963 LOC107914921 LOC107905970 LOC102615761 LOC11446855 LOC107805074 LOC4352802 LOC103640606 LOC123119288 LOC123102108 LOC123115532 LOC123396011 LOC8071477 LOC100836094
Function* cotton fiber protein cotton fiber protein uncharacterized LOC103865349 uncharacterized LOC103828906 uncharacterized LOC107959963 uncharacterized LOC107914921 uncharacterized LOC107905970 uncharacterized LOC102615761 uncharacterized LOC11446855 uncharacterized LOC107805074 uncharacterized LOC4352802 uncharacterized LOC103640606 uncharacterized LOC123119288 uncharacterized LOC123102108 uncharacterized LOC123115532 uncharacterized LOC123396011 uncharacterized LOC8071477 uncharacterized LOC100836094
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 3
cit04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00906 Carotenoid biosynthesis 2
sbi00010 Glycolysis / Gluconeogenesis 2
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818026 839899 103865349 103828906 107959963 107914921 107905970 102615761 11446855 107805074 4352802 103640606 123119288 123102108 123115532 123396011 8071477 100836094
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