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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.lig   IPMI2   isopropylmalate isomerase 2 
 ath-u.5   IPMI2   isopropylmalate isomerase 2 
 ath-r.7   IPMI2   isopropylmalate isomerase 2 
 ath-m.9   IPMI2   isopropylmalate isomerase 2 
 ath-e.2   IPMI2   isopropylmalate isomerase 2 
 ath-m.4.bio   IPMI2   isopropylmalate isomerase 2 
 ath-m.4.hor   IPMI2   isopropylmalate isomerase 2 
 ath-m.4.str   IPMI2   isopropylmalate isomerase 2 
 ath-m.4.tis   IPMI2   isopropylmalate isomerase 2 
 bra-r.6   103866695   3-isopropylmalate dehydratase small subunit 1 
 bna-r.1   106421092   3-isopropylmalate dehydratase small subunit 2 
 bna-r.1   106434491   3-isopropylmalate dehydratase small subunit 2 

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Top 50 coexpressed genes to IPMI2 (ath-m.4.lig coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to IPMI2 (ath-m.4.lig coexpression data)

CoexMap"818912"


athIPMI2 | Entrez gene ID : 818912      
Species ath bra bna osa sot sly cit ppo ghi bdi sbi gma mtr tae hvu vvi zma cre nta
Paralog 9 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00290 [list] [network] Valine, leucine and isoleucine biosynthesis (21 genes)
ath00966 [list] [network] Glucosinolate biosynthesis (26 genes)
ath01210 [list] [network] 2-Oxocarboxylic acid metabolism (103 genes)
GO BP
GO:0019761 [list] [network] glucosinolate biosynthetic process  (43 genes)  IMP  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (693 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO:0009536 [list] [network] plastid  (5443 genes)  IDA  
GO MF
GO:0003861 [list] [network] 3-isopropylmalate dehydratase activity  (4 genes)  IDA  
Protein NP_181838.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 4  (predict for NP_181838.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_181838.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.lig
for
IPMI2
ath-u.5
for
IPMI2
ath-r.7
for
IPMI2
ath-m.9
for
IPMI2
ath-e.2
for
IPMI2
ath-m.4.bio
for
IPMI2
ath-m.4.hor
for
IPMI2
ath-m.4.str
for
IPMI2
ath-m.4.tis
for
IPMI2
bra-r.6
for
103866695
bna-r.1
for
106421092
bna-r.1
for
106434491


Ortholog ID: 20624
Species ath bra bna bna
Symbol IPMI2 LOC103866695 LOC106421092 LOC106434491
Function* isopropylmalate isomerase 2 3-isopropylmalate dehydratase small subunit 1 3-isopropylmalate dehydratase small subunit 2 3-isopropylmalate dehydratase small subunit 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00966 Glucosinolate biosynthesis 12
ath01210 2-Oxocarboxylic acid metabolism 12
ath00290 Valine, leucine and isoleucine biosynthesis 5
ath00270 Cysteine and methionine metabolism 4
ath01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01210 2-Oxocarboxylic acid metabolism 10
bra00966 Glucosinolate biosynthesis 9
bra00290 Valine, leucine and isoleucine biosynthesis 3
bra00270 Cysteine and methionine metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01210 2-Oxocarboxylic acid metabolism 12
bna00966 Glucosinolate biosynthesis 10
bna00290 Valine, leucine and isoleucine biosynthesis 3
bna00260 Glycine, serine and threonine metabolism 2
bna00261 Monobactam biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01210 2-Oxocarboxylic acid metabolism 12
bna00966 Glucosinolate biosynthesis 10
bna00290 Valine, leucine and isoleucine biosynthesis 3
bna00260 Glycine, serine and threonine metabolism 2
bna00261 Monobactam biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818912 103866695 106421092 106434491
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