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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.lig   LCBK2   Diacylglycerol kinase family protein 
 ath-u.5   LCBK2   Diacylglycerol kinase family protein 
 ath-r.7   LCBK2   Diacylglycerol kinase family protein 
 ath-m.9   LCBK2   Diacylglycerol kinase family protein 
 ath-e.2   LCBK2   Diacylglycerol kinase family protein 
 ath-m.4.bio   LCBK2   Diacylglycerol kinase family protein 
 ath-m.4.hor   LCBK2   Diacylglycerol kinase family protein 
 ath-m.4.str   LCBK2   Diacylglycerol kinase family protein 
 ath-m.4.tis   LCBK2   Diacylglycerol kinase family protein 
 bra-r.6   103866950   sphingoid long-chain bases kinase 2, mitochondrial 
 bra-r.6   103866266   sphingoid long-chain bases kinase 2, mitochondrial 
 bna-r.1   106450926   sphingoid long-chain bases kinase 2, mitochondrial 
 bna-r.1   106450852   sphingoid long-chain bases kinase 2, mitochondrial-like 
 bna-r.1   106450847   sphingoid long-chain bases kinase 2, mitochondrial-like 
 ghi-r.1   107899243   sphingoid long-chain bases kinase 2, mitochondrial 
 ghi-r.1   107900873   sphingoid long-chain bases kinase 2, mitochondrial 
 ghi-r.1   107917568   sphingoid long-chain bases kinase 2, mitochondrial 
 cit-r.1   102619174   sphingoid long-chain bases kinase 2, mitochondrial 
 cit-r.1   127901172   sphingoid long-chain bases kinase 2, mitochondrial-like 
 gma-u.5   100797012   sphingoid long-chain bases kinase 2, mitochondrial 
 gma-u.5   100792824   sphingoid long-chain bases kinase 2, mitochondrial 
 vvi-u.5   100246487   sphingoid long-chain bases kinase 2, mitochondrial 
 ppo-u.5   7497221   sphingoid long-chain bases kinase 2, mitochondrial 
 mtr-u.5   11418979   sphingoid long-chain bases kinase 2, mitochondrial 
 sly-u.5   101256219   sphingoid long-chain bases kinase 2, mitochondrial 
 sot-r.1   102581909   sphingoid long-chain bases kinase 2, mitochondrial 
 nta-r.1   107773149   sphingoid long-chain bases kinase 2, mitochondrial-like 
 nta-r.1   107767384   sphingoid long-chain bases kinase 2, mitochondrial 
 osa-u.5   4331463   sphingoid long-chain bases kinase 2, mitochondrial 
 zma-u.5   100194359   uncharacterized LOC100194359 
 zma-u.5   103640455   uncharacterized LOC103640455 
 tae-r.2   123093536   sphingoid long-chain bases kinase 2, mitochondrial 
 tae-r.2   123105778   sphingoid long-chain bases kinase 2, mitochondrial 
 tae-r.2   123098808   sphingoid long-chain bases kinase 2, mitochondrial 
 hvu-r.1   123449826   sphingoid long-chain bases kinase 2, mitochondrial 
 sbi-r.1   8061453   sphingoid long-chain bases kinase 2, mitochondrial 
 bdi-r.1   100837210   sphingoid long-chain bases kinase 2, mitochondrial 
 cre-r.1   CHLRE_10g448650v5   uncharacterized protein 

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Top 50 coexpressed genes to LCBK2 (ath-m.4.lig coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to LCBK2 (ath-m.4.lig coexpression data)

CoexMap"819217"


athLCBK2 | Entrez gene ID : 819217      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 3 2 2 1 1 1 1 1 2 1 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006671 [list] [network] phytosphingosine metabolic process  (1 genes)  IMP  
GO:0009409 [list] [network] response to cold  (436 genes)  IMP  
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
GO:0008481 [list] [network] sphingosine kinase activity  (4 genes)  TAS  
Protein NP_566064.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 2  (predict for NP_566064.1)
Subcellular
localization
TargetP
chlo 4,  mito 4  (predict for NP_566064.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.lig
for
LCBK2
ath-u.5
for
LCBK2
ath-r.7
for
LCBK2
ath-m.9
for
LCBK2
ath-e.2
for
LCBK2
ath-m.4.bio
for
LCBK2
ath-m.4.hor
for
LCBK2
ath-m.4.str
for
LCBK2
ath-m.4.tis
for
LCBK2
bra-r.6
for
103866950
bra-r.6
for
103866266
bna-r.1
for
106450926
bna-r.1
for
106450852
bna-r.1
for
106450847
ghi-r.1
for
107899243
ghi-r.1
for
107900873
ghi-r.1
for
107917568
cit-r.1
for
102619174
cit-r.1
for
127901172
gma-u.5
for
100797012
gma-u.5
for
100792824
vvi-u.5
for
100246487
ppo-u.5
for
7497221
mtr-u.5
for
11418979
sly-u.5
for
101256219
sot-r.1
for
102581909
nta-r.1
for
107773149
nta-r.1
for
107767384
osa-u.5
for
4331463
zma-u.5
for
100194359
zma-u.5
for
103640455
tae-r.2
for
123093536
tae-r.2
for
123105778
tae-r.2
for
123098808
hvu-r.1
for
123449826
sbi-r.1
for
8061453
bdi-r.1
for
100837210
cre-r.1
for
CHLRE_10g448650v5


Ortholog ID: 6530
Species ath bra bra bna bna bna ghi ghi ghi cit cit gma gma vvi ppo mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol LCBK2 LOC103866950 LOC103866266 LOC106450852 LOC106450847 LOC106382929 LOC107899243 LOC107917568 LOC107940390 LOC102619174 LOC127901172 LOC100797012 LOC100792824 LOC100246487 LOC7497221 LOC11418979 LOC101256219 LOC102581909 LOC107773149 LOC107767384 LOC4331463 LOC100194359 LOC103640455 LOC123093536 LOC123105778 LOC123098808 LOC123449826 LOC8061453 LOC100837210 CHLRE_10g448650v5
Function* Diacylglycerol kinase family protein sphingoid long-chain bases kinase 2, mitochondrial sphingoid long-chain bases kinase 2, mitochondrial sphingoid long-chain bases kinase 2, mitochondrial-like sphingoid long-chain bases kinase 2, mitochondrial-like sphingoid long-chain bases kinase 2, mitochondrial sphingoid long-chain bases kinase 2, mitochondrial sphingoid long-chain bases kinase 2, mitochondrial sphingoid long-chain bases kinase 2, mitochondrial sphingoid long-chain bases kinase 2, mitochondrial sphingoid long-chain bases kinase 2, mitochondrial-like sphingoid long-chain bases kinase 2, mitochondrial sphingoid long-chain bases kinase 2, mitochondrial sphingoid long-chain bases kinase 2, mitochondrial sphingoid long-chain bases kinase 2, mitochondrial sphingoid long-chain bases kinase 2, mitochondrial sphingoid long-chain bases kinase 2, mitochondrial sphingoid long-chain bases kinase 2, mitochondrial sphingoid long-chain bases kinase 2, mitochondrial-like sphingoid long-chain bases kinase 2, mitochondrial sphingoid long-chain bases kinase 2, mitochondrial uncharacterized LOC100194359 uncharacterized LOC103640455 sphingoid long-chain bases kinase 2, mitochondrial sphingoid long-chain bases kinase 2, mitochondrial sphingoid long-chain bases kinase 2, mitochondrial sphingoid long-chain bases kinase 2, mitochondrial sphingoid long-chain bases kinase 2, mitochondrial sphingoid long-chain bases kinase 2, mitochondrial uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 5
ath01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 3
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 3
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00740 Riboflavin metabolism 2
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03060 Protein export 2
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 3
mtr00630 Glyoxylate and dicarboxylate metabolism 2
mtr04146 Peroxisome 2
mtr00350 Tyrosine metabolism 2
mtr00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
nta00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta00230 Purine metabolism 2
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 2
osa00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
tae04136 Autophagy - other 3
tae04382 Cornified envelope formation 3
tae00310 Lysine degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
tae04136 Autophagy - other 3
tae04382 Cornified envelope formation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
tae04136 Autophagy - other 3
tae04382 Cornified envelope formation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00280 Valine, leucine and isoleucine degradation 4
hvu04075 Plant hormone signal transduction 2
hvu00520 Amino sugar and nucleotide sugar metabolism 2
hvu01250 Biosynthesis of nucleotide sugars 2
hvu00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 4
sbi03060 Protein export 3
sbi00510 N-Glycan biosynthesis 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00511 Other glycan degradation 3
bdi04075 Plant hormone signal transduction 2
bdi04142 Lysosome 2
bdi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00280 Valine, leucine and isoleucine degradation 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819217 103866950 103866266 106450852 106450847 106382929 107899243 107917568 107940390 102619174 127901172 100797012 100792824 100246487 7497221 11418979 101256219 102581909 107773149 107767384 4331463 100194359 103640455 123093536 123105778 123098808 123449826 8061453 100837210 66055066
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