ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-m.4.lig	AT3G07910	reactive oxygen species modulator-like protein
ath-u.5	AT3G07910	reactive oxygen species modulator-like protein
ath-r.7	AT3G07910	reactive oxygen species modulator-like protein
ath-m.9	AT3G07910	reactive oxygen species modulator-like protein
ath-e.2	AT3G07910	reactive oxygen species modulator-like protein
ath-m.4.bio	AT3G07910	reactive oxygen species modulator-like protein
ath-m.4.hor	AT3G07910	reactive oxygen species modulator-like protein
ath-m.4.str	AT3G07910	reactive oxygen species modulator-like protein
ath-m.4.tis	AT3G07910	reactive oxygen species modulator-like protein
bra-r.6	103859250	reactive oxygen species modulator 1
bra-r.6	103848973	uncharacterized LOC103848973
bra-r.6	103870626	reactive oxygen species modulator 1-like
bna-r.1	111204512	reactive oxygen species modulator 1-like
bna-r.1	125599860	uncharacterized LOC125599860
bna-r.1	125580426	uncharacterized LOC125580426
ghi-r.1	107940361	uncharacterized LOC107940361
ghi-r.1	107939366	reactive oxygen species modulator 1
cit-r.1	102612241	hypothetical protein
gma-u.5	100817695	uncharacterized LOC100817695
gma-u.5	100798056	reactive oxygen species modulator 1
gma-u.5	100790370	reactive oxygen species modulator 1
vvi-u.5	100253405	uncharacterized LOC100253405
ppo-u.5	7460235	uncharacterized LOC7460235
ppo-u.5	7475015	uncharacterized LOC7475015
mtr-u.5	11430724	uncharacterized LOC11430724
mtr-u.5	25490370	reactive oxygen species modulator 1
sly-u.5	101257155	uncharacterized LOC101257155
sly-u.5	101256062	uncharacterized LOC101256062
sot-r.1	102579057	reactive oxygen species modulator 1-like
sot-r.1	102601159	reactive oxygen species modulator 1-like
sot-r.1	102587841	uncharacterized LOC102587841
nta-r.1	107794924	uncharacterized LOC107794924
nta-r.1	107774470	uncharacterized LOC107774470
osa-u.5	107279222	uncharacterized LOC107279222
zma-u.5	100278973	uncharacterized LOC100278973
zma-u.5	100272875	uncharacterized LOC100272875
tae-r.2	123122591	reactive oxygen species modulator 1
tae-r.2	123181267	reactive oxygen species modulator 1
tae-r.2	123047102	reactive oxygen species modulator 1
hvu-r.1	123432553	reactive oxygen species modulator 1
sbi-r.1	8079589	reactive oxygen species modulator 1
bdi-r.1	100828211	reactive oxygen species modulator 1
cre-r.1	CHLRE_01g010500v5	uncharacterized protein

Top 50 coexpressed genes to AT3G07910 (ath-m.4.lig coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to AT3G07910 (ath-m.4.lig coexpression data)

CoexMap"819982"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

NP_566324.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 6, vacu 1, mito 1, plas 1, E.R. 1, pero 1, E.R._plas 1, mito_plas 1

(predict for NP_566324.1)

Subcellular
localization
TargetP

scret 6

(predict for NP_566324.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.4.lig for AT3G07910	ath-u.5 for AT3G07910	ath-r.7 for AT3G07910	ath-m.9 for AT3G07910	ath-e.2 for AT3G07910	ath-m.4.bio for AT3G07910	ath-m.4.hor for AT3G07910	ath-m.4.str for AT3G07910	ath-m.4.tis for AT3G07910	bra-r.6 for 103859250	bra-r.6 for 103848973	bra-r.6 for 103870626	bna-r.1 for 111204512	bna-r.1 for 125599860	bna-r.1 for 125580426	ghi-r.1 for 107940361	ghi-r.1 for 107939366	cit-r.1 for 102612241	gma-u.5 for 100817695	gma-u.5 for 100798056	gma-u.5 for 100790370	vvi-u.5 for 100253405	ppo-u.5 for 7460235	ppo-u.5 for 7475015	mtr-u.5 for 11430724	mtr-u.5 for 25490370	sly-u.5 for 101257155	sly-u.5 for 101256062	sot-r.1 for 102579057	sot-r.1 for 102601159	sot-r.1 for 102587841	nta-r.1 for 107794924	nta-r.1 for 107774470	osa-u.5 for 107279222	zma-u.5 for 100278973	zma-u.5 for 100272875	tae-r.2 for 123122591	tae-r.2 for 123181267	tae-r.2 for 123047102	hvu-r.1 for 123432553	sbi-r.1 for 8079589	bdi-r.1 for 100828211	cre-r.1 for CHLRE_01g010500v5

Ortholog

Ortholog ID: 4071

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

reactive oxygen species modulator-like protein

reactive oxygen species modulator 1

uncharacterized LOC103848973

reactive oxygen species modulator 1-like

uncharacterized LOC125599860

reactive oxygen species modulator 1

uncharacterized LOC107940361

reactive oxygen species modulator 1

hypothetical protein

uncharacterized LOC100817695

reactive oxygen species modulator 1

uncharacterized LOC100253405

uncharacterized LOC7460235

uncharacterized LOC7475015

uncharacterized LOC11430724

reactive oxygen species modulator 1

uncharacterized LOC101257155

uncharacterized LOC101256062

reactive oxygen species modulator 1-like

uncharacterized LOC102587841

uncharacterized LOC102582795

uncharacterized LOC107794924

uncharacterized LOC107774470

uncharacterized LOC107279222

uncharacterized LOC100278973

uncharacterized LOC100272875

reactive oxygen species modulator 1

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	5
ath00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	7
bra03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03050	Proteasome	13
bra03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	9
bra03050	Proteasome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	6
bna03018	RNA degradation	5
bna03020	RNA polymerase	3
bna03420	Nucleotide excision repair	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	8
bna03018	RNA degradation	6
bna03020	RNA polymerase	4
bna03420	Nucleotide excision repair	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	6
ghi00190	Oxidative phosphorylation	2
ghi03030	DNA replication	2
ghi03410	Base excision repair	2
ghi03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	11
cit00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	8
gma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03420	Nucleotide excision repair	3
mtr03010	Ribosome	3
mtr03020	RNA polymerase	2
mtr00190	Oxidative phosphorylation	2
mtr00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	7
sly03010	Ribosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04120	Ubiquitin mediated proteolysis	2
sot04141	Protein processing in endoplasmic reticulum	2
sot00190	Oxidative phosphorylation	2
sot03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	5
nta00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	4
osa03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	2
zma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	4
tae03040	Spliceosome	2
tae03020	RNA polymerase	2
tae03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	5
tae03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	6
tae03010	Ribosome	4
tae03018	RNA degradation	2
tae03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	7
sbi03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03018	RNA degradation	3
bdi03008	Ribosome biogenesis in eukaryotes	2
bdi03020	RNA polymerase	2

Expression

Expression pattern

Entrez Gene ID^*

819982

103859250

103848973

103870626

125599860

106452865

106399347

107940361

107939366

102612241

100817695

100798056

100790370

100253405

7460235

7475015

11430724

25490370

101257155

101256062

102579057

102587841

102582795

107794924

107774470

107279222

100278973

100272875

123122591

123181267

123047102

123432553

8079589

100828211

5715013

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Species	ath	bra	bna	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	9	3	3	2	1	3	1	2	2	2	3	2	1	2	3	1	1	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT3G07910 (ath-m.4.lig coexpression data)

Top 50 enrichment test to AT3G07910 (ath-m.4.lig coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**