ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-m.4.lig	AT3G18295	DUF1639 family protein, putative (DUF1639)
ath-u.5	AT3G18295	DUF1639 family protein, putative (DUF1639)
ath-r.7	AT3G18295	DUF1639 family protein, putative (DUF1639)
ath-m.9	AT3G18295	DUF1639 family protein, putative (DUF1639)
ath-e.2	AT3G18295	DUF1639 family protein, putative (DUF1639)
ath-m.4.bio	AT3G18295	DUF1639 family protein, putative (DUF1639)
ath-m.4.hor	AT3G18295	DUF1639 family protein, putative (DUF1639)
ath-m.4.str	AT3G18295	DUF1639 family protein, putative (DUF1639)
ath-m.4.tis	AT3G18295	DUF1639 family protein, putative (DUF1639)
ath-u.5	AT4G17440	chromogranin (DUF1639)
ath-u.5	AT1G25370	hypothetical protein (DUF1639)
ath-u.5	AT1G48770	hypothetical protein (DUF1639)
bra-r.6	103871446	uncharacterized LOC103871446
bra-r.6	103829148	uncharacterized LOC103829148
bna-r.1	106445074	uncharacterized LOC106445074
bna-r.1	106440242	uncharacterized LOC106440242
bna-r.1	125594527	uncharacterized LOC125594527
ghi-r.1	107946214	uncharacterized LOC107946214
ghi-r.1	107903872	uncharacterized LOC107903872
ghi-r.1	107929391	uncharacterized LOC107929391
cit-r.1	102618144	uncharacterized LOC102618144
cit-r.1	102623112	hypothetical protein
gma-u.5	100779063	inactive histone-lysine N-methyltransferase 2E
gma-u.5	100782256	uncharacterized LOC100782256
vvi-u.5	109123925	uncharacterized LOC109123925
ppo-u.5	7482846	uncharacterized LOC7482846
ppo-u.5	7466890	uncharacterized LOC7466890
ppo-u.5	7486760	uncharacterized LOC7486760
mtr-u.5	11411191	uncharacterized LOC11411191
mtr-u.5	11406897	uncharacterized LOC11406897
sly-u.5	101257950	uncharacterized LOC101257950
sly-u.5	101260633	uncharacterized LOC101260633
sot-r.1	102580705	uncharacterized LOC102580705
sot-r.1	102604791	uncharacterized LOC102604791
sot-r.1	102591290	uncharacterized LOC102591290
nta-r.1	107775313	uncharacterized LOC107775313
nta-r.1	107775314	uncharacterized LOC107775314
nta-r.1	107782604	uncharacterized LOC107782604
osa-u.5	4339534	uncharacterized LOC4339534
osa-u.5	4327940	uncharacterized LOC4327940
osa-u.5	4327943	uncharacterized LOC4327943
zma-u.5	103651325	MAP7 domain-containing protein 1
zma-u.5	111347728	uncharacterized LOC111347728
zma-u.5	100275175	DUF1639 family protein
tae-r.2	123070529	uncharacterized LOC123070529
tae-r.2	123078940	formin-like protein 15
hvu-r.1	123440115	uncharacterized LOC123440115
hvu-r.1	123440113	uncharacterized LOC123440113
hvu-r.1	123418299	cell division protein ZipA-like
sbi-r.1	8074558	formin-like protein 18
sbi-r.1	8068036	uncharacterized LOC8068036
sbi-r.1	8063082	protein SCARECROW 1
bdi-r.1	100836244	ras/Rap GTPase-activating protein SynGAP
bdi-r.1	100837073	formin-like protein 14
bdi-r.1	100846507	formin-like protein 15

Top 50 coexpressed genes to AT3G18295 (ath-m.4.lig coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to AT3G18295 (ath-m.4.lig coexpression data)

CoexMap"821358"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0009507 [list] [network] chloroplast	(5014 genes)	HDA
GO:0005634 [list] [network] nucleus	(10367 genes)	ISM

GO MF

GO:0005515 [list] [network] protein binding

(5363 genes)

IPI

Protein

NP_188458.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 8, cyto 1

(predict for NP_188458.1)

Subcellular
localization
TargetP

mito 5

(predict for NP_188458.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.4.lig for AT3G18295	ath-u.5 for AT3G18295	ath-r.7 for AT3G18295	ath-m.9 for AT3G18295	ath-e.2 for AT3G18295	ath-m.4.bio for AT3G18295	ath-m.4.hor for AT3G18295	ath-m.4.str for AT3G18295	ath-m.4.tis for AT3G18295	ath-u.5 for AT4G17440	ath-u.5 for AT1G25370	ath-u.5 for AT1G48770	bra-r.6 for 103871446	bra-r.6 for 103829148	bna-r.1 for 106445074	bna-r.1 for 106440242	bna-r.1 for 125594527	ghi-r.1 for 107946214	ghi-r.1 for 107903872	ghi-r.1 for 107929391	cit-r.1 for 102618144	cit-r.1 for 102623112	gma-u.5 for 100779063	gma-u.5 for 100782256	vvi-u.5 for 109123925	ppo-u.5 for 7482846	ppo-u.5 for 7466890	ppo-u.5 for 7486760	mtr-u.5 for 11411191	mtr-u.5 for 11406897	sly-u.5 for 101257950	sly-u.5 for 101260633	sot-r.1 for 102580705	sot-r.1 for 102604791	sot-r.1 for 102591290	nta-r.1 for 107775313	nta-r.1 for 107775314	nta-r.1 for 107782604	osa-u.5 for 4339534	osa-u.5 for 4327940	osa-u.5 for 4327943	zma-u.5 for 103651325	zma-u.5 for 111347728	zma-u.5 for 100275175	tae-r.2 for 123070529	tae-r.2 for 123078940	hvu-r.1 for 123440115	hvu-r.1 for 123440113	hvu-r.1 for 123418299	sbi-r.1 for 8074558	sbi-r.1 for 8068036	sbi-r.1 for 8063082	bdi-r.1 for 100836244	bdi-r.1 for 100837073	bdi-r.1 for 100846507

Ortholog

Ortholog ID: 641

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

DUF1639 family protein, putative (DUF1639)

chromogranin (DUF1639)

hypothetical protein (DUF1639)

uncharacterized LOC103869577

uncharacterized LOC103835453

uncharacterized LOC106445074

uncharacterized LOC106345254

uncharacterized LOC106382087

uncharacterized LOC107929391

uncharacterized LOC121203041

digestive organ expansion factor homolog

uncharacterized LOC102618144

hypothetical protein

inactive histone-lysine N-methyltransferase 2E

uncharacterized LOC100812835

uncharacterized LOC109123925

uncharacterized LOC100853295

uncharacterized LOC100259406

uncharacterized LOC7482846

uncharacterized LOC7466890

uncharacterized LOC7486760

uncharacterized LOC11406897

uncharacterized LOC101257950

uncharacterized LOC101260633

uncharacterized LOC102580705

uncharacterized LOC102591290

uncharacterized LOC102591618

uncharacterized LOC107775313

uncharacterized LOC107775314

uncharacterized LOC107805966

uncharacterized LOC4327940

uncharacterized LOC4327943

uncharacterized LOC112936200

uncharacterized LOC111347728

serine/arginine repetitive matrix protein 1

DUF1639 family protein

formin-like protein 15

uncharacterized LOC123440115

uncharacterized LOC123440113

cell division protein ZipA-like

formin-like protein 18

protein SCARECROW 1

ras/Rap GTPase-activating protein SynGAP

formin-like protein 14

formin-like protein 15

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03015	mRNA surveillance pathway	3
ath03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	3
bra04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04130	SNARE interactions in vesicular transport	2
bna03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	3
ghi00010	Glycolysis / Gluconeogenesis	2
ghi00620	Pyruvate metabolism	2
ghi01200	Carbon metabolism	2
ghi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	2
cit04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00450	Selenocompound metabolism	2
gma03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04120	Ubiquitin mediated proteolysis	2
vvi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00071	Fatty acid degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04016	MAPK signaling pathway - plant	2
nta04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04016	MAPK signaling pathway - plant	2
osa04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00564	Glycerophospholipid metabolism	3
tae00592	alpha-Linolenic acid metabolism	3
tae03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03420	Nucleotide excision repair	3
tae04120	Ubiquitin mediated proteolysis	3
tae04141	Protein processing in endoplasmic reticulum	3
tae03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00030	Pentose phosphate pathway	2
sbi00710	Carbon fixation by Calvin cycle	2
sbi01200	Carbon metabolism	2
sbi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04626	Plant-pathogen interaction	3
bdi04075	Plant hormone signal transduction	2

Expression

Expression pattern

Entrez Gene ID^*

821358

827455

841299

103869577

103835453

106445074

106345254

106382087

107929391

121203041

121219889

102618144

102623112

100779063

100812835

109123925

100853295

100259406

7482846

7466890

7486760

11406897

101257950

101260633

102580705

102591290

102591618

107775313

107775314

107805966

4327940

4327943

112936200

111347728

103635296

100273686

123078940

123058493

123440115

123440113

123418299

8074558

8063082

100836244

100837073

100846507

The preparation time of this page was 0.2 [sec].


Species	ath	bra	bna	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	12	2	3	3	2	2	1	3	2	2	3	3	3	3	2	3	3	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT3G18295 (ath-m.4.lig coexpression data)

Top 50 enrichment test to AT3G18295 (ath-m.4.lig coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**