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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.lig   AT3G42800   AF-like protein 
 ath-u.5   AT3G42800   AF-like protein 
 ath-r.7   AT3G42800   AF-like protein 
 ath-m.9   AT3G42800   AF-like protein 
 ath-e.2   AT3G42800   AF-like protein 
 ath-m.4.bio   AT3G42800   AF-like protein 
 ath-m.4.hor   AT3G42800   AF-like protein 
 ath-m.4.str   AT3G42800   AF-like protein 
 ath-m.4.tis   AT3G42800   AF-like protein 
 ath-u.5   AT3G13980   SKI/DACH domain protein 
 ath-u.5   AT5G12050   rho GTPase-activating protein 
 ath-u.5   AT1G54200   DNA mismatch repair Msh6-like protein 
 bra-r.6   103871064   protein BIG GRAIN 1-like B 
 bra-r.6   103850812   protein BIG GRAIN 1-like D 
 bra-r.6   103855953   protein BIG GRAIN 1-like D 
 bna-r.1   111211026   protein BIG GRAIN 1-like D 
 bna-r.1   106380524   protein BIG GRAIN 1-like A 
 ghi-r.1   107901079   protein BIG GRAIN 1-like B 
 ghi-r.1   107904326   protein BIG GRAIN 1-like A 
 cit-r.1   102607281   protein BIG GRAIN 1-like B 
 cit-r.1   102611186   protein BIG GRAIN 1-like B 
 gma-u.5   100809904   protein BIG GRAIN 1-like B 
 gma-u.5   100779754   protein BIG GRAIN 1-like B 
 vvi-u.5   100255952   protein BIG GRAIN 1-like A 
 vvi-u.5   100246362   protein BIG GRAIN 1-like A 
 ppo-u.5   7490951   protein BIG GRAIN 1-like B 
 ppo-u.5   7478358   protein BIG GRAIN 1-like B 
 mtr-u.5   25500538   protein BIG GRAIN 1-like B 
 mtr-u.5   25481988   protein BIG GRAIN 1-like A 
 mtr-u.5   11432422   protein BIG GRAIN 1-like B 
 sly-u.5   101259034   protein BIG GRAIN 1-like B 
 sly-u.5   101257581   protein BIG GRAIN 1-like A 
 sly-u.5   101246163   protein BIG GRAIN 1-like A 
 sot-r.1   102605706   protein BIG GRAIN 1-like A 
 sot-r.1   102599331   protein BIG GRAIN 1-like A 
 nta-r.1   107771473   protein BIG GRAIN 1-like A 
 nta-r.1   107782796   protein BIG GRAIN 1-like A 
 nta-r.1   107799723   protein BIG GRAIN 1-like A 
 osa-u.5   4331799   protein BIG GRAIN 1-like 
 osa-u.5   107279147   protein BIG GRAIN 1-like 
 zma-u.5   103639522   uncharacterized LOC103639522 
 zma-u.5   100280045   uncharacterized LOC100280045 
 tae-r.2   123084734   protein BIG GRAIN 1-like 
 tae-r.2   123100324   protein BIG GRAIN 1 
 hvu-r.1   123447094   protein BIG GRAIN 1-like 
 sbi-r.1   8059797   protein BIG GRAIN 1 
 bdi-r.1   100841574   protein BIG GRAIN 1 

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Top 50 coexpressed genes to AT3G42800 (ath-m.4.lig coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G42800 (ath-m.4.lig coexpression data)

CoexMap"823322"


athAT3G42800 | Entrez gene ID : 823322      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 12 3 2 2 2 2 2 2 3 3 2 3 2 2 2 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010929 [list] [network] positive regulation of auxin mediated signaling pathway  (9 genes)  ISS  
GO:0060918 [list] [network] auxin transport  (100 genes)  ISS  
GO CC
GO:0005886 [list] [network] plasma membrane  (2598 genes)  ISS  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_189866.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  mito 4  (predict for NP_189866.1)
Subcellular
localization
TargetP
mito 5,  other 3  (predict for NP_189866.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.lig
for
AT3G42800
ath-u.5
for
AT3G42800
ath-r.7
for
AT3G42800
ath-m.9
for
AT3G42800
ath-e.2
for
AT3G42800
ath-m.4.bio
for
AT3G42800
ath-m.4.hor
for
AT3G42800
ath-m.4.str
for
AT3G42800
ath-m.4.tis
for
AT3G42800
ath-u.5
for
AT3G13980
ath-u.5
for
AT5G12050
ath-u.5
for
AT1G54200
bra-r.6
for
103871064
bra-r.6
for
103850812
bra-r.6
for
103855953
bna-r.1
for
111211026
bna-r.1
for
106380524
ghi-r.1
for
107901079
ghi-r.1
for
107904326
cit-r.1
for
102607281
cit-r.1
for
102611186
gma-u.5
for
100809904
gma-u.5
for
100779754
vvi-u.5
for
100255952
vvi-u.5
for
100246362
ppo-u.5
for
7490951
ppo-u.5
for
7478358
mtr-u.5
for
25500538
mtr-u.5
for
25481988
mtr-u.5
for
11432422
sly-u.5
for
101259034
sly-u.5
for
101257581
sly-u.5
for
101246163
sot-r.1
for
102605706
sot-r.1
for
102599331
nta-r.1
for
107771473
nta-r.1
for
107782796
nta-r.1
for
107799723
osa-u.5
for
4331799
osa-u.5
for
107279147
zma-u.5
for
103639522
zma-u.5
for
100280045
tae-r.2
for
123084734
tae-r.2
for
123100324
hvu-r.1
for
123447094
sbi-r.1
for
8059797
bdi-r.1
for
100841574


Ortholog ID: 903
Species ath ath ath bra bra bra bna bna bna ghi ghi ghi cit cit vvi vvi ppo ppo mtr mtr mtr sly sly sly sot nta nta osa osa zma zma tae hvu sbi bdi
Symbol AT3G42800 AT3G13980 AT5G12050 LOC103850812 LOC103846670 LOC103832627 LOC111211026 LOC106345763 LOC106380810 LOC107906074 LOC107929882 LOC107961654 LOC102607281 LOC102611186 LOC100255952 LOC100246362 LOC7478358 LOC7462232 LOC25500538 LOC25481988 LOC25494190 LOC101259034 LOC101257581 LOC101246163 LOC102605706 LOC107771473 LOC107812681 LOC4331799 LOC107279147 LOC103639522 LOC100277616 LOC123093359 LOC123447094 LOC8059797 LOC100841574
Function* AF-like protein SKI/DACH domain protein rho GTPase-activating protein protein BIG GRAIN 1-like D protein BIG GRAIN 1-like D protein BIG GRAIN 1-like B protein BIG GRAIN 1-like D protein BIG GRAIN 1-like B protein BIG GRAIN 1-like D protein BIG GRAIN 1-like A protein BIG GRAIN 1-like B protein BIG GRAIN 1-like B protein BIG GRAIN 1-like B protein BIG GRAIN 1-like B protein BIG GRAIN 1-like A protein BIG GRAIN 1-like A protein BIG GRAIN 1-like B protein BIG GRAIN 1-like A protein BIG GRAIN 1-like B protein BIG GRAIN 1-like A protein BIG GRAIN 1-like B protein BIG GRAIN 1-like B protein BIG GRAIN 1-like A protein BIG GRAIN 1-like A protein BIG GRAIN 1-like A protein BIG GRAIN 1-like A protein BIG GRAIN 1-like B protein BIG GRAIN 1-like protein BIG GRAIN 1-like uncharacterized LOC103639522 uncharacterized LOC100277616 protein BIG GRAIN 1 protein BIG GRAIN 1-like protein BIG GRAIN 1 protein BIG GRAIN 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 5
ath00380 Tryptophan metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 5
bna00908 Zeatin biosynthesis 2
bna00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00908 Zeatin biosynthesis 2
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04016 MAPK signaling pathway - plant 3
sly04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04814 Motor proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00380 Tryptophan metabolism 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 823322 820612 831078 103850812 103846670 103832627 111211026 106345763 106380810 107906074 107929882 107961654 102607281 102611186 100255952 100246362 7478358 7462232 25500538 25481988 25494190 101259034 101257581 101246163 102605706 107771473 107812681 4331799 107279147 103639522 100277616 123093359 123447094 8059797 100841574
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