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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.lig   AT3G47530   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-u.5   AT3G47530   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-r.7   AT3G47530   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.9   AT3G47530   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-e.2   AT3G47530   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.bio   AT3G47530   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.hor   AT3G47530   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.str   AT3G47530   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.tis   AT3G47530   Pentatricopeptide repeat (PPR) superfamily protein 
 bra-r.6   103873580   pentatricopeptide repeat-containing protein At3g47530 
 bna-r.1   125594336   pentatricopeptide repeat-containing protein At3g47530-like 
 bna-r.1   106377203   pentatricopeptide repeat-containing protein At3g47530 
 bna-r.1   106347714   pentatricopeptide repeat-containing protein At3g47530-like 
 ghi-r.1   121206432   pentatricopeptide repeat-containing protein At3g47530-like 
 ghi-r.1   107931391   pentatricopeptide repeat-containing protein At3g47530 
 cit-r.1   102628238   pentatricopeptide repeat-containing protein At3g47530 
 gma-u.5   100788135   pentatricopeptide repeat-containing protein At3g47530 
 vvi-u.5   100258783   pentatricopeptide repeat-containing protein At3g47530 
 mtr-u.5   120580098   pentatricopeptide repeat-containing protein At3g47530 
 sly-u.5   101263802   pentatricopeptide repeat-containing protein At3g47530 
 sot-r.1   102599249   pentatricopeptide repeat-containing protein At3g47530 
 nta-r.1   107783259   pentatricopeptide repeat-containing protein At3g47530-like 
 nta-r.1   107821464   pentatricopeptide repeat-containing protein At3g47530-like 
 osa-u.5   4345655   pentatricopeptide repeat-containing protein At3g47530 
 zma-u.5   100281656   uncharacterized LOC100281656 
 hvu-r.1   123450212   pentatricopeptide repeat-containing protein At3g47530-like 
 sbi-r.1   8075670   pentatricopeptide repeat-containing protein At3g47530 
 bdi-r.1   100842869   pentatricopeptide repeat-containing protein At3g47530 

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Top 50 coexpressed genes to AT3G47530 (ath-m.4.lig coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G47530 (ath-m.4.lig coexpression data)

CoexMap""


athAT3G47530 | Entrez gene ID : 823907      
Species ath bra bna ghi cit gma vvi mtr sly sot nta osa zma hvu sbi bdi tae cre ppo
Paralog 9 1 3 2 1 1 1 1 1 1 2 1 1 1 1 1 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
Function Pentatricopeptide repeat (PPR) superfamily protein
KEGG
GO BP
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (391 genes)  IEA  
Protein NP_190337.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 3,  chlo 1,  mito 1,  plas 1,  vacu 1,  chlo_mito 1,  mito_plas 1  (predict for NP_190337.1)
Subcellular
localization
TargetP
other 5  (predict for NP_190337.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.lig
for
AT3G47530
ath-u.5
for
AT3G47530
ath-r.7
for
AT3G47530
ath-m.9
for
AT3G47530
ath-e.2
for
AT3G47530
ath-m.4.bio
for
AT3G47530
ath-m.4.hor
for
AT3G47530
ath-m.4.str
for
AT3G47530
ath-m.4.tis
for
AT3G47530
bra-r.6
for
103873580
bna-r.1
for
125594336
bna-r.1
for
106377203
bna-r.1
for
106347714
ghi-r.1
for
121206432
ghi-r.1
for
107931391
cit-r.1
for
102628238
gma-u.5
for
100788135
vvi-u.5
for
100258783
mtr-u.5
for
120580098
sly-u.5
for
101263802
sot-r.1
for
102599249
nta-r.1
for
107783259
nta-r.1
for
107821464
osa-u.5
for
4345655
zma-u.5
for
100281656
hvu-r.1
for
123450212
sbi-r.1
for
8075670
bdi-r.1
for
100842869

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Ortholog ID: 9522
Species ath bra bna bna bna ghi ghi cit gma vvi mtr sly sot nta nta osa zma hvu sbi bdi
Symbol AT3G47530 LOC103873580 LOC125594336 LOC106377203 LOC106347714 LOC121206432 LOC107931391 LOC102628238 LOC100788135 LOC100258783 LOC120580098 LOC101263802 LOC102599249 LOC107783259 LOC107821464 LOC4345655 LOC100281656 LOC123450212 LOC8075670 LOC100842869
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At3g47530 pentatricopeptide repeat-containing protein At3g47530-like pentatricopeptide repeat-containing protein At3g47530 pentatricopeptide repeat-containing protein At3g47530-like pentatricopeptide repeat-containing protein At3g47530-like pentatricopeptide repeat-containing protein At3g47530 pentatricopeptide repeat-containing protein At3g47530 pentatricopeptide repeat-containing protein At3g47530 pentatricopeptide repeat-containing protein At3g47530 pentatricopeptide repeat-containing protein At3g47530 pentatricopeptide repeat-containing protein At3g47530 pentatricopeptide repeat-containing protein At3g47530 pentatricopeptide repeat-containing protein At3g47530-like pentatricopeptide repeat-containing protein At3g47530-like pentatricopeptide repeat-containing protein At3g47530 uncharacterized LOC100281656 pentatricopeptide repeat-containing protein At3g47530-like pentatricopeptide repeat-containing protein At3g47530 pentatricopeptide repeat-containing protein At3g47530
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 5
hvu03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 823907 103873580 125594336 106377203 106347714 121206432 107931391 102628238 100788135 100258783 120580098 101263802 102599249 107783259 107821464 4345655 100281656 123450212 8075670 100842869
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