Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.lig   AT3G53820   C2H2 and C2HC zinc fingers superfamily protein 
 ath-m.9   AT3G53820   C2H2 and C2HC zinc fingers superfamily protein 
 ath-m.4.bio   AT3G53820   C2H2 and C2HC zinc fingers superfamily protein 
 ath-m.4.hor   AT3G53820   C2H2 and C2HC zinc fingers superfamily protein 
 ath-m.4.str   AT3G53820   C2H2 and C2HC zinc fingers superfamily protein 
 ath-m.4.tis   AT3G53820   C2H2 and C2HC zinc fingers superfamily protein 
 ath-u.5   AT5G43540   C2H2 and C2HC zinc fingers superfamily protein 
 bra-r.6   103841305   transcriptional regulator TAC1 
 bra-r.6   103839233   transcriptional regulator TAC1-like 
 bna-r.1   111213782   zinc finger protein 5-like 
 ghi-r.1   107960699   transcriptional regulator TAC1 
 ghi-r.1   107936729   transcriptional regulator SUPERMAN 
 gma-u.5   100527901   uncharacterized LOC100527901 
 gma-u.5   102661128   zinc finger protein 10 
 mtr-u.5   25483021   zinc finger protein 11 
 mtr-u.5   25484307   zinc finger protein GIS 
 mtr-u.5   25498560   transcriptional regulator TAC1 

close


Top 50 coexpressed genes to AT3G53820 (ath-m.4.lig coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to AT3G53820 (ath-m.4.lig coexpression data)

CoexMap"824549"


athAT3G53820 | Entrez gene ID : 824549      
Species ath bra bna ghi gma mtr nta zma cre osa vvi bdi sbi tae sot hvu cit ppo sly
Paralog 7 2 1 2 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
Protein NP_190950.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  chlo 4,  mito 1,  cysk 1  (predict for NP_190950.1)
Subcellular
localization
TargetP
mito 8  (predict for NP_190950.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.lig
for
AT3G53820
ath-m.9
for
AT3G53820
ath-m.4.bio
for
AT3G53820
ath-m.4.hor
for
AT3G53820
ath-m.4.str
for
AT3G53820
ath-m.4.tis
for
AT3G53820
ath-u.5
for
AT5G43540
bra-r.6
for
103841305
bra-r.6
for
103839233
bna-r.1
for
111213782
ghi-r.1
for
107960699
ghi-r.1
for
107936729
gma-u.5
for
100527901
gma-u.5
for
102661128
mtr-u.5
for
25483021
mtr-u.5
for
25484307
mtr-u.5
for
25498560


Ortholog ID: 1582
Species ath bra bra ghi gma gma gma mtr mtr
Symbol AT5G43540 LOC103841305 LOC103839233 LOC107940902 LOC100527901 LOC102661128 N479 LOC25483021 LOC25484307
Function* C2H2 and C2HC zinc fingers superfamily protein transcriptional regulator TAC1 transcriptional regulator TAC1-like transcriptional regulator TAC1 uncharacterized LOC100527901 zinc finger protein 10 C2H2 zinc finger protein zinc finger protein 11 zinc finger protein GIS
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00940 Phenylpropanoid biosynthesis 2
ghi00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00040 Pentose and glucuronate interconversions 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834374 103841305 103839233 107940902 100527901 102661128 100101897 25483021 25484307
The preparation time of this page was 0.1 [sec].