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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.lig   NTT   C2H2-type zinc finger family protein 
 ath-u.5   NTT   C2H2-type zinc finger family protein 
 ath-r.7   NTT   C2H2-type zinc finger family protein 
 ath-m.9   NTT   C2H2-type zinc finger family protein 
 ath-e.2   NTT   C2H2-type zinc finger family protein 
 ath-m.4.bio   NTT   C2H2-type zinc finger family protein 
 ath-m.4.hor   NTT   C2H2-type zinc finger family protein 
 ath-m.4.str   NTT   C2H2-type zinc finger family protein 
 ath-m.4.tis   NTT   C2H2-type zinc finger family protein 
 ath-u.5   WIP4   WIP domain protein 4 
 ath-u.5   WIP3   WIP domain protein 3 
 bra-r.6   103871572   zinc finger protein WIP3 
 ghi-r.1   107919568   zinc finger protein WIP6 
 ghi-r.1   107915692   zinc finger protein WIP2 
 cit-r.1   102615447   zinc finger protein WIP3 
 cit-r.1   102621206   zinc finger protein WIP2-like 
 gma-u.5   100788451   zinc finger protein WIP3 
 gma-u.5   100789416   zinc finger protein WIP5-like 
 vvi-u.5   100245035   zinc finger protein WIP2 
 mtr-u.5   112421394   zinc finger protein WIP2 
 sly-u.5   101257840   zinc finger protein WIP2 
 sly-u.5   101254266   zinc finger protein WIP2 
 sot-r.1   102583940   zinc finger protein WIP2-like 
 nta-r.1   107782988   zinc finger protein WIP4-like 
 nta-r.1   107772754   zinc finger protein WIP2 
 osa-u.5   4338934   protein TRANSPARENT TESTA 1 
 osa-u.5   4341518   zinc finger protein WIP2 
 osa-u.5   4346617   zinc finger protein WIP2 
 zma-u.5   100284341   zinc finger, C2H2 type family protein 
 zma-u.5   103630405   protein TRANSPARENT TESTA 1 
 zma-u.5   100277627   uncharacterized LOC100277627 
 tae-r.2   123104152   zinc finger protein WIP2 
 hvu-r.1   123415354   protein TRANSPARENT TESTA 1-like 
 hvu-r.1   123440509   protein TRANSPARENT TESTA 1-like 
 sbi-r.1   8062351   protein TRANSPARENT TESTA 1 
 bdi-r.1   100846229   zinc finger protein WIP2 
 bdi-r.1   100845582   protein TRANSPARENT TESTA 1 
 bdi-r.1   100825670   zinc finger protein WIP2 

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Top 50 coexpressed genes to NTT (ath-m.4.lig coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to NTT (ath-m.4.lig coexpression data)

CoexMap"824936"


athNTT | Entrez gene ID : 824936      
Species ath bra ghi cit gma vvi mtr sly sot nta osa zma tae hvu sbi bdi ppo cre bna
Paralog 11 1 2 2 2 1 1 2 1 2 3 3 1 2 1 3 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:1990058 [list] [network] fruit replum development  (2 genes)  IMP  
GO:0010500 [list] [network] transmitting tissue development  (4 genes)  IMP  
GO:0001709 [list] [network] cell fate determination  (7 genes)  IMP  
GO:0080022 [list] [network] primary root development  (40 genes)  IGI  
GO:0009860 [list] [network] pollen tube growth  (151 genes)  IMP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  TAS  
GO:0010468 [list] [network] regulation of gene expression  (2062 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_191326.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_191326.1)
Subcellular
localization
TargetP
chlo 7  (predict for NP_191326.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.lig
for
NTT
ath-u.5
for
NTT
ath-r.7
for
NTT
ath-m.9
for
NTT
ath-e.2
for
NTT
ath-m.4.bio
for
NTT
ath-m.4.hor
for
NTT
ath-m.4.str
for
NTT
ath-m.4.tis
for
NTT
ath-u.5
for
WIP4
ath-u.5
for
WIP3
bra-r.6
for
103871572
ghi-r.1
for
107919568
ghi-r.1
for
107915692
cit-r.1
for
102615447
cit-r.1
for
102621206
gma-u.5
for
100788451
gma-u.5
for
100789416
vvi-u.5
for
100245035
mtr-u.5
for
112421394
sly-u.5
for
101257840
sly-u.5
for
101254266
sot-r.1
for
102583940
nta-r.1
for
107782988
nta-r.1
for
107772754
osa-u.5
for
4338934
osa-u.5
for
4341518
osa-u.5
for
4346617
zma-u.5
for
100284341
zma-u.5
for
103630405
zma-u.5
for
100277627
tae-r.2
for
123104152
hvu-r.1
for
123415354
hvu-r.1
for
123440509
sbi-r.1
for
8062351
bdi-r.1
for
100846229
bdi-r.1
for
100845582
bdi-r.1
for
100825670


Ortholog ID: 239
Species ath bra bra bna ghi ghi ghi cit cit gma vvi vvi vvi ppo mtr sly sly nta nta osa osa zma zma tae hvu sbi sbi sbi bdi bdi
Symbol NTT LOC103871572 LOC103843405 LOC106376525 LOC107889166 LOC107901465 LOC107950636 LOC102615447 LOC102621206 LOC100813583 LOC100245035 LOC100265548 LOC100244743 LOC7466819 LOC112421394 LOC101257840 LOC101254266 LOC107804971 LOC107816764 LOC4341518 LOC4347420 LOC109944872 LOC103638807 LOC123162376 LOC123415354 LOC8067642 LOC8072505 LOC8055865 LOC100845582 LOC100825670
Function* C2H2-type zinc finger family protein zinc finger protein WIP3 zinc finger protein WIP3 zinc finger protein WIP2 zinc finger protein WIP3 protein TRANSPARENT TESTA 1 zinc finger protein WIP2 zinc finger protein WIP3 zinc finger protein WIP2-like zinc finger protein WIP2 zinc finger protein WIP2 protein TRANSPARENT TESTA 1-like zinc finger protein WIP2 zinc finger protein WIP3 zinc finger protein WIP2 zinc finger protein WIP2 zinc finger protein WIP2 zinc finger protein WIP3 zinc finger protein WIP2 zinc finger protein WIP2 zinc finger protein WIP2 zinc finger protein WIP3 zinc finger protein WIP2 zinc finger protein WIP2 protein TRANSPARENT TESTA 1-like zinc finger protein WIP2 protein TRANSPARENT TESTA 1 zinc finger protein WIP2 protein TRANSPARENT TESTA 1 zinc finger protein WIP2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00999 Biosynthesis of various plant secondary metabolites 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04016 MAPK signaling pathway - plant 3
vvi04075 Plant hormone signal transduction 3
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824936 103871572 103843405 106376525 107889166 107901465 107950636 102615447 102621206 100813583 100245035 100265548 100244743 7466819 112421394 101257840 101254266 107804971 107816764 4341518 4347420 109944872 103638807 123162376 123415354 8067642 8072505 8055865 100845582 100825670
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