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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.lig   AT4G11690   Pentatricopeptide repeat (PPR-like) superfamily protein 
 ath-m.9   AT4G11690   Pentatricopeptide repeat (PPR-like) superfamily protein 
 ath-m.4.bio   AT4G11690   Pentatricopeptide repeat (PPR-like) superfamily protein 
 ath-m.4.hor   AT4G11690   Pentatricopeptide repeat (PPR-like) superfamily protein 
 ath-m.4.str   AT4G11690   Pentatricopeptide repeat (PPR-like) superfamily protein 
 ath-m.4.tis   AT4G11690   Pentatricopeptide repeat (PPR-like) superfamily protein 
 bra-r.6   103849364   pentatricopeptide repeat-containing protein At4g11690 
 bna-r.1   106416679   pentatricopeptide repeat-containing protein At4g11690 
 bna-r.1   106422286   pentatricopeptide repeat-containing protein At4g11690-like 
 ghi-r.1   107950162   pentatricopeptide repeat-containing protein At4g11690-like 
 cit-r.1   102619343   pentatricopeptide repeat-containing protein At4g11690 
 gma-u.5   100817044   pentatricopeptide repeat-containing protein At4g11690 
 gma-u.5   100819169   pentatricopeptide repeat-containing protein At4g11690 
 vvi-u.5   104879546   pentatricopeptide repeat-containing protein At4g11690 
 mtr-u.5   25495670   pentatricopeptide repeat-containing protein At4g11690 
 sot-r.1   102603994   pentatricopeptide repeat-containing protein At4g11690 
 nta-r.1   107766125   uncharacterized LOC107766125 
 nta-r.1   107806536   uncharacterized LOC107806536 

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Top 50 coexpressed genes to AT4G11690 (ath-m.4.lig coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT4G11690 (ath-m.4.lig coexpression data)

CoexMap"826774"


athAT4G11690 | Entrez gene ID : 826774    
Species ath bra bna ghi cit gma vvi mtr sot nta ppo bdi zma sly cre hvu sbi osa tae
Paralog 6 1 2 1 1 2 1 1 1 2 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0080156 [list] [network] mitochondrial mRNA modification  (26 genes)  IMP  
GO:0009737 [list] [network] response to abscisic acid  (550 genes)  IMP  
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  IMP  
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
Protein NP_001328868.1 [sequence] [blastp]
NP_192906.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  extr 2,  cyto 1  (predict for NP_001328868.1)
chlo 6,  extr 2,  cyto 1  (predict for NP_192906.1)
Subcellular
localization
TargetP
scret 6  (predict for NP_001328868.1)
scret 6  (predict for NP_192906.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.lig
for
AT4G11690
ath-m.9
for
AT4G11690
ath-m.4.bio
for
AT4G11690
ath-m.4.hor
for
AT4G11690
ath-m.4.str
for
AT4G11690
ath-m.4.tis
for
AT4G11690
bra-r.6
for
103849364
bna-r.1
for
106416679
bna-r.1
for
106422286
ghi-r.1
for
107950162
cit-r.1
for
102619343
gma-u.5
for
100817044
gma-u.5
for
100819169
vvi-u.5
for
104879546
mtr-u.5
for
25495670
sot-r.1
for
102603994
nta-r.1
for
107766125
nta-r.1
for
107806536


Ortholog ID: 13174
Species bra bna bna ghi cit gma gma vvi mtr sot nta nta
Symbol LOC103849364 LOC106416679 LOC106422286 LOC107950162 LOC102619343 LOC100817044 LOC100819169 LOC104879546 LOC25495670 LOC102603994 LOC107766125 LOC107806536
Function* pentatricopeptide repeat-containing protein At4g11690 pentatricopeptide repeat-containing protein At4g11690 pentatricopeptide repeat-containing protein At4g11690-like pentatricopeptide repeat-containing protein At4g11690-like pentatricopeptide repeat-containing protein At4g11690 pentatricopeptide repeat-containing protein At4g11690 pentatricopeptide repeat-containing protein At4g11690 pentatricopeptide repeat-containing protein At4g11690 pentatricopeptide repeat-containing protein At4g11690 pentatricopeptide repeat-containing protein At4g11690 uncharacterized LOC107766125 uncharacterized LOC107806536
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 5
bra00966 Glucosinolate biosynthesis 5
bra01210 2-Oxocarboxylic acid metabolism 5
bra00270 Cysteine and methionine metabolism 4
bra00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103849364 106416679 106422286 107950162 102619343 100817044 100819169 104879546 25495670 102603994 107766125 107806536
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