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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.lig   HTA2   histone H2A 2 
 ath-u.5   HTA2   histone H2A 2 
 ath-r.7   HTA2   histone H2A 2 
 ath-m.9   HTA2   histone H2A 2 
 ath-e.2   HTA2   histone H2A 2 
 ath-m.4.bio   HTA2   histone H2A 2 
 ath-m.4.hor   HTA2   histone H2A 2 
 ath-m.4.str   HTA2   histone H2A 2 
 ath-m.4.tis   HTA2   histone H2A 2 
 ath-u.5   GAMMA-H2AX   gamma histone  
 ath-u.5   HTA13   histone H2A 13 
 ath-u.5   RAT5   Histone superfamily protein 
 bra-r.6   103866954   probable histone H2A.3 
 bra-r.6   103868592   probable histone H2A.1 
 bra-r.6   103869292   probable histone H2A.2 
 bna-r.1   106445749   probable histone H2A.3 
 bna-r.1   106451851   probable histone H2A.2 
 bna-r.1   106453183   probable histone H2AXa 
 ghi-r.1   107920392   probable histone H2A.1 
 ghi-r.1   107953195   histone H2AX 
 ghi-r.1   107952215   histone H2AX 
 cit-r.1   102619114   histone H2AX 
 cit-r.1   102618811   histone H2AX 
 cit-r.1   102609655   histone H2A.6 
 gma-u.5   100782447   probable histone H2A.1 
 gma-u.5   100818215   histone H2AX 
 gma-u.5   100816280   probable histone H2A.3 
 vvi-u.5   100257319   histone H2AX-like 
 vvi-u.5   100254490   histone H2AX 
 vvi-u.5   100259607   histone H2AX 
 ppo-u.5   18109775   histone H2AX 
 ppo-u.5   18098846   histone H2AX 
 ppo-u.5   18095880   histone H2A.6 
 mtr-u.5   11409476   histone H2A.6 
 mtr-u.5   11434190   histone H2AX 
 mtr-u.5   11443483   probable histone H2AXb 
 sly-u.5   101264975   histone H2AX-like 
 sly-u.5   101262690   histone H2A.6 
 sly-u.5   101247665   probable histone H2A.1 
 sot-r.1   102597610   probable histone H2AXb 
 sot-r.1   102582157   probable histone H2A.1 
 sot-r.1   102586233   histone H2A.6-like 
 nta-r.1   107770854   histone H2A.6 
 nta-r.1   107831487   histone H2A.6-like 
 nta-r.1   107768546   histone H2AX-like 
 osa-u.5   9267462   probable histone H2A.3 
 osa-u.5   4333939   probable histone H2AXa 
 osa-u.5   4352398   probable histone H2AXb 
 zma-u.5   100274138   Histone H2A 
 zma-u.5   103640970   probable histone H2AXb 
 zma-u.5   100193816   uncharacterized LOC100193816 
 tae-r.2   123146235   probable histone H2AXb 
 tae-r.2   123149421   probable histone H2AXb 
 tae-r.2   123149422   probable histone H2AXb 
 hvu-r.1   123401046   probable histone H2AXb 
 hvu-r.1   123407816   probable histone H2AXb 
 hvu-r.1   123425798   probable histone H2A.2 
 sbi-r.1   8081715   probable histone H2A.1 
 sbi-r.1   8064629   probable histone H2AXb 
 sbi-r.1   8059983   probable histone H2AXa 
 bdi-r.1   100830704   probable histone H2A.7 
 bdi-r.1   100830394   probable histone H2A.2 
 bdi-r.1   100846160   probable histone H2AXa 
 cre-r.1   CHLRE_17g710400v5   uncharacterized protein 
 cre-r.1   CHLRE_12g505550v5   uncharacterized protein 
 cre-r.1   CHLRE_12g504500v5   uncharacterized protein 

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Top 50 coexpressed genes to HTA2 (ath-m.4.lig coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to HTA2 (ath-m.4.lig coexpression data)

CoexMap"828831"


athHTA2 | Entrez gene ID : 828831      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 12 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03082 [list] [network] ATP-dependent chromatin remodeling (64 genes)
GO BP
GO CC
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
Protein NP_001190852.1 [sequence] [blastp]
NP_194453.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  chlo 1  (predict for NP_001190852.1)
nucl 9,  chlo 1  (predict for NP_194453.1)
Subcellular
localization
TargetP
mito 5  (predict for NP_001190852.1)
mito 5  (predict for NP_194453.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.lig
for
HTA2
ath-u.5
for
HTA2
ath-r.7
for
HTA2
ath-m.9
for
HTA2
ath-e.2
for
HTA2
ath-m.4.bio
for
HTA2
ath-m.4.hor
for
HTA2
ath-m.4.str
for
HTA2
ath-m.4.tis
for
HTA2
ath-u.5
for
GAMMA-H2AX
ath-u.5
for
HTA13
ath-u.5
for
RAT5
bra-r.6
for
103866954
bra-r.6
for
103868592
bra-r.6
for
103869292
bna-r.1
for
106445749
bna-r.1
for
106451851
bna-r.1
for
106453183
ghi-r.1
for
107920392
ghi-r.1
for
107953195
ghi-r.1
for
107952215
cit-r.1
for
102619114
cit-r.1
for
102618811
cit-r.1
for
102609655
gma-u.5
for
100782447
gma-u.5
for
100818215
gma-u.5
for
100816280
vvi-u.5
for
100257319
vvi-u.5
for
100254490
vvi-u.5
for
100259607
ppo-u.5
for
18109775
ppo-u.5
for
18098846
ppo-u.5
for
18095880
mtr-u.5
for
11409476
mtr-u.5
for
11434190
mtr-u.5
for
11443483
sly-u.5
for
101264975
sly-u.5
for
101262690
sly-u.5
for
101247665
sot-r.1
for
102597610
sot-r.1
for
102582157
sot-r.1
for
102586233
nta-r.1
for
107770854
nta-r.1
for
107831487
nta-r.1
for
107768546
osa-u.5
for
9267462
osa-u.5
for
4333939
osa-u.5
for
4352398
zma-u.5
for
100274138
zma-u.5
for
103640970
zma-u.5
for
100193816
tae-r.2
for
123146235
tae-r.2
for
123149421
tae-r.2
for
123149422
hvu-r.1
for
123401046
hvu-r.1
for
123407816
hvu-r.1
for
123425798
sbi-r.1
for
8081715
sbi-r.1
for
8064629
sbi-r.1
for
8059983
bdi-r.1
for
100830704
bdi-r.1
for
100830394
bdi-r.1
for
100846160
cre-r.1
for
CHLRE_17g710400v5
cre-r.1
for
CHLRE_12g505550v5
cre-r.1
for
CHLRE_12g504500v5


Ortholog ID: 242
Species ath ath ath bra bra bna bna ghi ghi ghi cit cit cit gma gma gma vvi vvi vvi ppo ppo ppo mtr mtr mtr sly sly sly sot sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi bdi cre cre cre
Symbol HTA13 H2AXA HTA10 LOC103832842 LOC103844917 LOC106345992 LOC125603080 LOC107920392 LOC107899136 LOC107903497 LOC102619114 LOC102618811 LOC102620423 LOC100818215 LOC106798115 LOC100793396 LOC100257319 LOC100254490 LOC100259607 LOC18109775 LOC18095880 LOC112323895 LOC11443483 LOC11430690 LOC11408670 LOC101264975 LOC101262690 LOC101256806 LOC102582157 LOC102586233 LOC102592368 LOC107800855 LOC107780380 LOC107822337 LOC9267462 LOC4333939 LOC4352128 LOC100193816 LOC100194327 LOC100273666 LOC123161694 LOC123044613 LOC123115855 LOC123401046 LOC123425798 LOC123425799 LOC8081715 LOC8059983 LOC8081716 LOC100830704 LOC100830394 LOC100846160 CHLRE_17g714100v5 CHLRE_06g268050v5 CHLRE_12g506250v5
Function* histone H2A 13 Histone superfamily protein histone H2A 10 probable histone H2A.1 histone H2A.6 probable histone H2A.2 probable histone H2A.2 probable histone H2A.1 probable histone H2AXb histone H2A.6 histone H2AX histone H2AX histone H2AX histone H2AX histone H2AX probable histone H2A.3 histone H2AX-like histone H2AX histone H2AX histone H2AX histone H2A.6 histone H2AX probable histone H2AXb histone H2AX histone H2A.6 histone H2AX-like histone H2A.6 probable histone H2AXb probable histone H2A.1 histone H2A.6-like probable histone H2AXb histone H2AX-like histone H2A.6-like histone H2A.6 probable histone H2A.3 probable histone H2AXa probable histone H2A.7 uncharacterized LOC100193816 Histone H2A uncharacterized LOC100273666 probable histone H2AXb histone H2A.4-like probable histone H2AXb probable histone H2AXb probable histone H2A.2 histone H2A.4 probable histone H2A.1 probable histone H2AXa probable histone H2A.2 probable histone H2A.7 probable histone H2A.2 probable histone H2AXa uncharacterized protein uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 2
bra00010 Glycolysis / Gluconeogenesis 2
bra00620 Pyruvate metabolism 2
bra00710 Carbon fixation by Calvin cycle 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
cit03060 Protein export 2
cit04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03030 DNA replication 2
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 5
gma00240 Pyrimidine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 11
vvi01232 Nucleotide metabolism 3
vvi00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00240 Pyrimidine metabolism 3
vvi01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 4
ppo03013 Nucleocytoplasmic transport 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 4
ppo04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 6
sot00240 Pyrimidine metabolism 3
sot01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 3
nta04075 Plant hormone signal transduction 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 5
osa03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 4
hvu04141 Protein processing in endoplasmic reticulum 2
hvu04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 6
bdi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03082 ATP-dependent chromatin remodeling 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03082 ATP-dependent chromatin remodeling 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03082 ATP-dependent chromatin remodeling 13
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821614 837409 841528 103832842 103844917 106345992 125603080 107920392 107899136 107903497 102619114 102618811 102620423 100818215 106798115 100793396 100257319 100254490 100259607 18109775 18095880 112323895 11443483 11430690 11408670 101264975 101262690 101256806 102582157 102586233 102592368 107800855 107780380 107822337 9267462 4333939 4352128 100193816 100194327 100273666 123161694 123044613 123115855 123401046 123425798 123425799 8081715 8059983 8081716 100830704 100830394 100846160 5725954 66053636 5716480
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