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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.lig   IAA29   indole-3-acetic acid inducible 29 
 ath-u.5   IAA29   indole-3-acetic acid inducible 29 
 ath-r.7   IAA29   indole-3-acetic acid inducible 29 
 ath-m.9   IAA29   indole-3-acetic acid inducible 29 
 ath-e.2   IAA29   indole-3-acetic acid inducible 29 
 ath-m.4.bio   IAA29   indole-3-acetic acid inducible 29 
 ath-m.4.hor   IAA29   indole-3-acetic acid inducible 29 
 ath-m.4.str   IAA29   indole-3-acetic acid inducible 29 
 ath-m.4.tis   IAA29   indole-3-acetic acid inducible 29 
 bra-r.6   103851160   auxin-responsive protein IAA29 
 bra-r.6   103862115   auxin-responsive protein IAA29 
 bna-r.1   106399310   auxin-responsive protein IAA29-like 
 bna-r.1   106423411   auxin-responsive protein IAA29-like 
 ghi-r.1   107906873   auxin-responsive protein IAA29 
 ghi-r.1   107933180   auxin-responsive protein IAA29 
 ghi-r.1   107942686   auxin-responsive protein IAA9-like 
 cit-r.1   102617957   auxin-responsive protein IAA29 
 cit-r.1   102625468   auxin-responsive protein IAA29 
 gma-u.5   100802759   auxin-responsive protein IAA29-like 
 gma-u.5   100804096   auxin-responsive protein IAA13-like 
 vvi-u.5   104879021   auxin-responsive protein IAA28 
 ppo-u.5   7470082   auxin-responsive protein IAA29 
 ppo-u.5   7474682   auxin-responsive protein IAA29 
 sly-u.5   101055555   IAA35 
 sly-u.5   IAA29   auxin-responsive protein IAA29 
 sly-u.5   101055556   IAA36 
 sot-r.1   102585622   auxin-responsive protein IAA29-like 
 sot-r.1   102602017   auxin-responsive protein IAA29-like 
 sot-r.1   102583661   auxin-responsive protein IAA20-like 
 nta-r.1   107811613   auxin-responsive protein IAA29-like 
 nta-r.1   107762242   auxin-responsive protein IAA28 
 nta-r.1   107779361   auxin-responsive protein IAA5 

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Top 50 coexpressed genes to IAA29 (ath-m.4.lig coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to IAA29 (ath-m.4.lig coexpression data)

CoexMap"829361"


athIAA29 | Entrez gene ID : 829361      
Species ath bra bna ghi cit gma vvi ppo sly sot nta cre hvu mtr tae bdi osa zma sbi
Paralog 9 2 2 3 2 2 1 2 3 3 3 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath04075 [list] [network] Plant hormone signal transduction (433 genes)
GO BP
GO:0010583 [list] [network] response to cyclopentenone  (2 genes)  IEP  
GO:0009635 [list] [network] response to herbicide  (11 genes)  IEP  
GO:0010218 [list] [network] response to far red light  (57 genes)  IEP  
GO:0010114 [list] [network] response to red light  (73 genes)  IEP  
GO:0009733 [list] [network] response to auxin  (344 genes)  TAS  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001329438.1 [sequence] [blastp]
NP_001329439.1 [sequence] [blastp]
NP_567891.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 3,  chlo 2,  nucl 2,  mito 1,  extr 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001329438.1)
cyto 4,  nucl 2,  extr 2,  chlo 1  (predict for NP_001329439.1)
cyto 4,  nucl 2,  extr 2,  chlo 1  (predict for NP_567891.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001329438.1)
other 7  (predict for NP_001329439.1)
other 7  (predict for NP_567891.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.lig
for
IAA29
ath-u.5
for
IAA29
ath-r.7
for
IAA29
ath-m.9
for
IAA29
ath-e.2
for
IAA29
ath-m.4.bio
for
IAA29
ath-m.4.hor
for
IAA29
ath-m.4.str
for
IAA29
ath-m.4.tis
for
IAA29
bra-r.6
for
103851160
bra-r.6
for
103862115
bna-r.1
for
106399310
bna-r.1
for
106423411
ghi-r.1
for
107906873
ghi-r.1
for
107933180
ghi-r.1
for
107942686
cit-r.1
for
102617957
cit-r.1
for
102625468
gma-u.5
for
100802759
gma-u.5
for
100804096
vvi-u.5
for
104879021
ppo-u.5
for
7470082
ppo-u.5
for
7474682
sly-u.5
for
101055555
sly-u.5
for
IAA29
sly-u.5
for
101055556
sot-r.1
for
102585622
sot-r.1
for
102602017
sot-r.1
for
102583661
nta-r.1
for
107811613
nta-r.1
for
107762242
nta-r.1
for
107779361


Ortholog ID: 4962
Species ath bra bra bna bna ghi ghi ghi cit cit gma gma vvi ppo ppo sly sly sly sot sot sot nta nta nta
Symbol IAA29 LOC103851160 LOC103862115 LOC106399310 LOC106369639 LOC107906873 LOC107942686 LOC107953686 LOC102617957 LOC102625468 LOC100802759 LOC100804096 LOC104879021 LOC7470082 LOC7474682 LOC101055555 IAA29 LOC101055556 LOC102585622 LOC102602017 LOC102583661 LOC107811613 LOC107779361 LOC107813390
Function* indole-3-acetic acid inducible 29 auxin-responsive protein IAA29 auxin-responsive protein IAA29 auxin-responsive protein IAA29-like auxin-responsive protein IAA29-like auxin-responsive protein IAA29 auxin-responsive protein IAA9-like auxin-responsive protein IAA9-like auxin-responsive protein IAA29 auxin-responsive protein IAA29 auxin-responsive protein IAA29-like auxin-responsive protein IAA13-like auxin-responsive protein IAA28 auxin-responsive protein IAA29 auxin-responsive protein IAA29 IAA35 auxin-responsive protein IAA29 IAA36 auxin-responsive protein IAA29-like auxin-responsive protein IAA29-like auxin-responsive protein IAA20-like auxin-responsive protein IAA29-like auxin-responsive protein IAA5 auxin-induced protein 22C
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 3
bra00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 4
bna00905 Brassinosteroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 3
bna00905 Brassinosteroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 9
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 10
gma00905 Brassinosteroid biosynthesis 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04016 MAPK signaling pathway - plant 6
sly04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 5
nta00905 Brassinosteroid biosynthesis 2
nta00062 Fatty acid elongation 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 5
nta00905 Brassinosteroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 5
nta00905 Brassinosteroid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829361 103851160 103862115 106399310 106369639 107906873 107942686 107953686 102617957 102625468 100802759 100804096 104879021 7470082 7474682 101055555 101055553 101055556 102585622 102602017 102583661 107811613 107779361 107813390
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